Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63450 | Canola | cytosol | 82.1 | 83.19 |
| Bra010670.1-P | Field mustard | cytosol | 81.22 | 82.3 |
| CDX90348 | Canola | cytosol | 81.22 | 82.3 |
| Bra033633.1-P | Field mustard | cytosol | 79.48 | 80.18 |
| KRH35966 | Soybean | cytosol | 60.26 | 65.4 |
| KRG90803 | Soybean | cytosol | 58.95 | 65.22 |
| PGSC0003DMT400028452 | Potato | cytosol | 57.64 | 64.08 |
| Solyc12g033130.1.1 | Tomato | cytosol | 56.33 | 62.62 |
| VIT_01s0011g03390.t01 | Wine grape | cytosol | 57.21 | 61.79 |
| GSMUA_Achr9P28440_001 | Banana | cytosol | 53.28 | 56.74 |
| TraesCS4A01G268800.1 | Wheat | cytosol | 56.33 | 56.58 |
| TraesCS4B01G045400.1 | Wheat | cytosol | 56.33 | 56.58 |
| TraesCS4D01G045300.1 | Wheat | cytosol | 56.33 | 56.58 |
| Os03t0710700-00 | Rice | cytosol | 55.46 | 54.74 |
| EER91001 | Sorghum | mitochondrion | 55.46 | 54.27 |
| Zm00001d033718_P001 | Maize | cytosol | 53.71 | 52.34 |
| HORVU4Hr1G007360.7 | Barley | cytosol | 54.15 | 44.44 |
| AT2G34690.1 | Thale cress | cytosol | 39.3 | 43.69 |
Protein Annotations
| Gene3D:1.10.3520.10 | MapMan:5.4.6 | EntrezGene:830121 | UniProt:A0A178V447 | ProteinID:AEE87101.1 | ArrayExpress:AT4G39670 |
| EnsemblPlantsGene:AT4G39670 | RefSeq:AT4G39670 | TAIR:AT4G39670 | RefSeq:AT4G39670-TAIR-G | EnsemblPlants:AT4G39670.1 | TAIR:AT4G39670.1 |
| EMBL:AY126985 | EMBL:BT000526 | ProteinID:CAA18753.1 | ProteinID:CAB80630.1 | InterPro:GLTP_sf | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0120009 |
| GO:GO:0120013 | InterPro:Glycolipid_transfer_prot_dom | InterPro:IPR036497 | RefSeq:NP_195677.2 | ProteinID:OAP00491.1 | PFAM:PF08718 |
| PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001185 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR10219 | PANTHER:PTHR10219:SF28 | UniProt:Q8L7U7 |
| SUPFAM:SSF110004 | UniParc:UPI00000ABF14 | SEG:seg | : | : | : |
Description
ACD11 homolog protein [Source:UniProtKB/Swiss-Prot;Acc:Q8L7U7]
Coordinates
chr4:+:18409846..18411069
Molecular Weight (calculated)
26515.3 Da
IEP (calculated)
4.296
GRAVY (calculated)
-0.322
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEVEEEEE DMFEDAVCTT QARVNTPLSV ITEAFEDLAD LVKPQRSDEI DEDELRLDDF CSACTHVSVL FNCLGFAFKF AEMEYIAKVK DLVEASKTFE
101: TLHNILDLDV EKETVKTPGS HSRNLRRVRQ GLDLIRAIFE QFLIADDYSL KDAATTAYTE VCAPFHTWAV RTAVYAGMYT LPTRDQLLLR LNETDQSVEK
201: NMRRYMEASR PIIEYIDKLY IERNIKLDW
101: TLHNILDLDV EKETVKTPGS HSRNLRRVRQ GLDLIRAIFE QFLIADDYSL KDAATTAYTE VCAPFHTWAV RTAVYAGMYT LPTRDQLLLR LNETDQSVEK
201: NMRRYMEASR PIIEYIDKLY IERNIKLDW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.