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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 2
  • mitochondrion 5
  • peroxisome 1
  • plastid 2
  • cytosol 2
PPI

Inferred distinct locusB in Crop

locusBlocations
EES12559
EES14570
KXG31128

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d033718_P001 Maize cytosol 91.88 91.49
TraesCS4B01G045400.1 Wheat cytosol 85.04 87.28
TraesCS4D01G045300.1 Wheat cytosol 84.62 86.84
TraesCS4A01G268800.1 Wheat cytosol 84.62 86.84
Os03t0710700-00 Rice cytosol 80.77 81.47
CDX96005 Canola cytosol 26.5 71.26
GSMUA_Achr9P28440_001 Banana cytosol 62.82 68.37
HORVU4Hr1G007360.7 Barley cytosol 73.93 62.01
PGSC0003DMT400028452 Potato cytosol 52.56 59.71
Solyc12g033130.1.1 Tomato cytosol 51.71 58.74
VIT_01s0011g03390.t01 Wine grape cytosol 52.99 58.49
KRG90803 Soybean cytosol 51.71 58.45
KRH35966 Soybean cytosol 50.85 56.4
CDX90348 Canola cytosol 53.85 55.75
Bra010670.1-P Field mustard cytosol 53.85 55.75
CDY38602 Canola cytosol 53.42 55.56
AT4G39670.1 Thale cress cytosol 54.27 55.46
Bra033633.1-P Field mustard cytosol 53.42 55.07
CDY63450 Canola cytosol 52.99 54.87
Bra004321.1-P Field mustard cytosol 54.27 50.0
EER90780 Sorghum cytosol 43.59 49.51
CDX96006 Canola cytosol 16.24 28.57
Protein Annotations
Gene3D:1.10.3520.10MapMan:5.4.6EntrezGene:8063396UniProt:C5WN45EnsemblPlants:EER91001ProteinID:EER91001
ProteinID:EER91001.1InterPro:GLTP_sfGO:GO:0003674GO:GO:0005215GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006810GO:GO:0008150
GO:GO:0008289GO:GO:0009987GO:GO:0016043GO:GO:0017089GO:GO:0051861GO:GO:0120009
GO:GO:0120013InterPro:Glycolipid_transfer_prot_domInterPro:IPR036497PFAM:PF08718PANTHER:PTHR10219PANTHER:PTHR10219:SF28
EnsemblPlantsGene:SORBI_3001G118300SUPFAM:SSF110004unigene:Sbi.7933UniParc:UPI0001A82560RefSeq:XP_002464003.1SEG:seg
Description
hypothetical protein
Coordinates
chr1:+:9224730..9227086
Molecular Weight (calculated)
25808.9 Da
IEP (calculated)
5.125
GRAVY (calculated)
-0.034
Length
234 amino acids
Sequence
(BLAST)
001: MLGFRQMAWS SSAQAQAPSE QLCEGAAAVV AARQGMETPL TAVAEAFEEL ARGMEADGGE LRLAPFSDTC ALVSVLFSSL GMAFRFAEIE YVTKVNDLIG
101: AGKSYRTLSD ILDKDIQNDC VKKQGSHSRN LRRVRLGLGL IKALFEQFLA TEGSLYDAAT TAYGQVCAPF HSWAIRKAVG AGMYTLPTRE QLIVRLNETD
201: FSVQKEMRRY IDASSPIIEY IDNLFLSRNI SLDW
Best Arabidopsis Sequence Match ( AT4G39670.1 )
(BLAST)
001: MEAEVEEEEE DMFEDAVCTT QARVNTPLSV ITEAFEDLAD LVKPQRSDEI DEDELRLDDF CSACTHVSVL FNCLGFAFKF AEMEYIAKVK DLVEASKTFE
101: TLHNILDLDV EKETVKTPGS HSRNLRRVRQ GLDLIRAIFE QFLIADDYSL KDAATTAYTE VCAPFHTWAV RTAVYAGMYT LPTRDQLLLR LNETDQSVEK
201: NMRRYMEASR PIIEYIDKLY IERNIKLDW
Arabidopsis Description
ACD11 homolog protein [Source:UniProtKB/Swiss-Prot;Acc:Q8L7U7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.