Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 5
- peroxisome 1
- plastid 2
- cytosol 2
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G39670.1 | EES12559 | AT3G60600.1 | 18845362 |
AT4G39670.1 | EES14570 | AT3G60600.1 | 18845362 |
AT4G39670.1 | KXG31128 | AT3G60600.1 | 18845362 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d033718_P001 | Maize | cytosol | 91.88 | 91.49 |
TraesCS4B01G045400.1 | Wheat | cytosol | 85.04 | 87.28 |
TraesCS4D01G045300.1 | Wheat | cytosol | 84.62 | 86.84 |
TraesCS4A01G268800.1 | Wheat | cytosol | 84.62 | 86.84 |
Os03t0710700-00 | Rice | cytosol | 80.77 | 81.47 |
CDX96005 | Canola | cytosol | 26.5 | 71.26 |
GSMUA_Achr9P28440_001 | Banana | cytosol | 62.82 | 68.37 |
HORVU4Hr1G007360.7 | Barley | cytosol | 73.93 | 62.01 |
PGSC0003DMT400028452 | Potato | cytosol | 52.56 | 59.71 |
Solyc12g033130.1.1 | Tomato | cytosol | 51.71 | 58.74 |
VIT_01s0011g03390.t01 | Wine grape | cytosol | 52.99 | 58.49 |
KRG90803 | Soybean | cytosol | 51.71 | 58.45 |
KRH35966 | Soybean | cytosol | 50.85 | 56.4 |
CDX90348 | Canola | cytosol | 53.85 | 55.75 |
Bra010670.1-P | Field mustard | cytosol | 53.85 | 55.75 |
CDY38602 | Canola | cytosol | 53.42 | 55.56 |
AT4G39670.1 | Thale cress | cytosol | 54.27 | 55.46 |
Bra033633.1-P | Field mustard | cytosol | 53.42 | 55.07 |
CDY63450 | Canola | cytosol | 52.99 | 54.87 |
Bra004321.1-P | Field mustard | cytosol | 54.27 | 50.0 |
EER90780 | Sorghum | cytosol | 43.59 | 49.51 |
CDX96006 | Canola | cytosol | 16.24 | 28.57 |
Protein Annotations
Gene3D:1.10.3520.10 | MapMan:5.4.6 | EntrezGene:8063396 | UniProt:C5WN45 | EnsemblPlants:EER91001 | ProteinID:EER91001 |
ProteinID:EER91001.1 | InterPro:GLTP_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 |
GO:GO:0008289 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0017089 | GO:GO:0051861 | GO:GO:0120009 |
GO:GO:0120013 | InterPro:Glycolipid_transfer_prot_dom | InterPro:IPR036497 | PFAM:PF08718 | PANTHER:PTHR10219 | PANTHER:PTHR10219:SF28 |
EnsemblPlantsGene:SORBI_3001G118300 | SUPFAM:SSF110004 | unigene:Sbi.7933 | UniParc:UPI0001A82560 | RefSeq:XP_002464003.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:+:9224730..9227086
Molecular Weight (calculated)
25808.9 Da
IEP (calculated)
5.125
GRAVY (calculated)
-0.034
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGFRQMAWS SSAQAQAPSE QLCEGAAAVV AARQGMETPL TAVAEAFEEL ARGMEADGGE LRLAPFSDTC ALVSVLFSSL GMAFRFAEIE YVTKVNDLIG
101: AGKSYRTLSD ILDKDIQNDC VKKQGSHSRN LRRVRLGLGL IKALFEQFLA TEGSLYDAAT TAYGQVCAPF HSWAIRKAVG AGMYTLPTRE QLIVRLNETD
201: FSVQKEMRRY IDASSPIIEY IDNLFLSRNI SLDW
101: AGKSYRTLSD ILDKDIQNDC VKKQGSHSRN LRRVRLGLGL IKALFEQFLA TEGSLYDAAT TAYGQVCAPF HSWAIRKAVG AGMYTLPTRE QLIVRLNETD
201: FSVQKEMRRY IDASSPIIEY IDNLFLSRNI SLDW
001: MEAEVEEEEE DMFEDAVCTT QARVNTPLSV ITEAFEDLAD LVKPQRSDEI DEDELRLDDF CSACTHVSVL FNCLGFAFKF AEMEYIAKVK DLVEASKTFE
101: TLHNILDLDV EKETVKTPGS HSRNLRRVRQ GLDLIRAIFE QFLIADDYSL KDAATTAYTE VCAPFHTWAV RTAVYAGMYT LPTRDQLLLR LNETDQSVEK
201: NMRRYMEASR PIIEYIDKLY IERNIKLDW
101: TLHNILDLDV EKETVKTPGS HSRNLRRVRQ GLDLIRAIFE QFLIADDYSL KDAATTAYTE VCAPFHTWAV RTAVYAGMYT LPTRDQLLLR LNETDQSVEK
201: NMRRYMEASR PIIEYIDKLY IERNIKLDW
Arabidopsis Description
ACD11 homolog protein [Source:UniProtKB/Swiss-Prot;Acc:Q8L7U7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.