Factsheet for Zm00001d033718_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d017390_P001
Zm00001d025939_P003
Zm00001d036342_P001
Zm00001d049553_P001
Zm00001d051288_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39670.1	Zm00001d017390_P001	AT3G60600.1	18845362
AT4G39670.1	Zm00001d025939_P003	AT3G60600.1	18845362
AT4G39670.1	Zm00001d036342_P001	AT3G60600.1	18845362
AT4G39670.1	Zm00001d049553_P001	AT3G60600.1	18845362
AT4G39670.1	Zm00001d051288_P001	AT3G60600.1	18845362

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91001	Sorghum	mitochondrion	91.49	91.88
TraesCS4B01G045400.1	Wheat	cytosol	82.13	84.65
TraesCS4D01G045300.1	Wheat	cytosol	81.7	84.21
TraesCS4A01G268800.1	Wheat	cytosol	81.7	84.21
Os03t0710700-00	Rice	cytosol	78.3	79.31
CDX96005	Canola	cytosol	25.96	70.11
GSMUA_Achr9P28440_001	Banana	cytosol	62.13	67.91
HORVU4Hr1G007360.7	Barley	cytosol	71.91	60.57
PGSC0003DMT400028452	Potato	cytosol	51.49	58.74
Solyc12g033130.1.1	Tomato	cytosol	50.64	57.77
VIT_01s0011g03390.t01	Wine grape	cytosol	51.91	57.55
KRG90803	Soybean	cytosol	50.64	57.49
KRH35966	Soybean	cytosol	49.79	55.45
CDY38602	Canola	cytosol	52.34	54.67
CDX90348	Canola	cytosol	52.34	54.42
Bra010670.1-P	Field mustard	cytosol	52.34	54.42
Bra033633.1-P	Field mustard	cytosol	51.91	53.74
AT4G39670.1	Thale cress	cytosol	52.34	53.71
CDY63450	Canola	cytosol	51.49	53.54
Bra004321.1-P	Field mustard	cytosol	54.04	50.0
Zm00001d034346_P002	Maize	mitochondrion	43.83	39.92
CDX96006	Canola	cytosol	16.6	29.32

Protein Annotations

Gene3D:1.10.3520.10	EntrezGene:100273327	MapMan:5.4.6	UniProt:A0A1D6L1R0	InterPro:GLTP_sf	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0120009	GO:GO:0120013
InterPro:Glycolipid_transfer_prot_dom	InterPro:IPR036497	ProteinID:ONM08463.1	PFAM:PF08718	PANTHER:PTHR10219	PANTHER:PTHR10219:SF28
SUPFAM:SSF110004	UniParc:UPI00018C680D	EnsemblPlantsGene:Zm00001d033718	EnsemblPlants:Zm00001d033718_P001	EnsemblPlants:Zm00001d033718_T001	SEG:seg

Description

ACD11 homolog protein

Coordinates

chr1:-:272130665..272132998

Molecular Weight (calculated)

26190.4 Da

IEP (calculated)

4.855

GRAVY (calculated)

-0.112

Length

235 amino acids

Sequence
(BLAST)

001: MLGFRQMPWS SAQEQEQAPS EQLCEGVSAV VAARQGMEKP LTAVAEAFEE LARGMEADGG ELRLAPFSDS CALVSVLFSS LGMAFRFAEI EYVTKVNDLI
101: GAGKSYRTLS DILDKDIQND CVKKQGSHSR NLRRVRLGLG LIKALFEQFL DTEGTLYDAA TIAYGQVCAP FHSWAIRKAV GAGMYTLPTR EQLIVRLNET
201: DFSVQKEMRR YIDASSPIIE YIDNLFLSRN ISLDW

Best Arabidopsis Sequence Match ( AT4G39670.1 )
(BLAST)

001: MEAEVEEEEE DMFEDAVCTT QARVNTPLSV ITEAFEDLAD LVKPQRSDEI DEDELRLDDF CSACTHVSVL FNCLGFAFKF AEMEYIAKVK DLVEASKTFE
101: TLHNILDLDV EKETVKTPGS HSRNLRRVRQ GLDLIRAIFE QFLIADDYSL KDAATTAYTE VCAPFHTWAV RTAVYAGMYT LPTRDQLLLR LNETDQSVEK
201: NMRRYMEASR PIIEYIDKLY IERNIKLDW

Arabidopsis Description

ACD11 homolog protein [Source:UniProtKB/Swiss-Prot;Acc:Q8L7U7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.