CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43977	Canola	cytosol	99.21	99.21
CDX87706	Canola	cytosol	34.92	50.57
CDX84289	Canola	cytosol	37.3	45.19
CDY43980	Canola	cytosol	61.9	38.81
CDX96005	Canola	cytosol	26.19	37.93
CDX84635	Canola	cytosol, endoplasmic reticulum, peroxisome	60.32	36.89
CDX79572	Canola	cytosol	60.32	36.89
EER90780	Sorghum	cytosol	55.56	33.98
TraesCS5A01G423200.1	Wheat	cytosol	54.76	33.5
KRH11758	Soybean	cytosol	54.76	33.17
TraesCS5D01G431800.1	Wheat	cytosol	54.76	33.17
GSMUA_Achr5P02430_001	Banana	endoplasmic reticulum, extracellular	46.03	33.14
KRH36758	Soybean	cytosol	53.17	32.52
Os03t0784900-01	Rice	cytosol	52.38	31.88
PGSC0003DMT400054370	Potato	cytosol	52.38	31.43
Solyc02g070250.2.1	Tomato	cytosol	51.59	30.95
VIT_10s0003g04580.t01	Wine grape	cytosol	50.0	30.73
TraesCS5B01G425200.1	Wheat	cytosol	54.76	27.82
Zm00001d034346_P002	Maize	mitochondrion	54.76	26.74
VIT_11s0052g00260.t01	Wine grape	cytosol, plastid	38.1	23.3
HORVU5Hr1G103320.2	Barley	nucleus, plastid	53.17	23.1
VIT_11s0052g00280.t01	Wine grape	cytosol	37.3	22.71
CDY38602	Canola	cytosol	39.68	22.22
CDX90348	Canola	cytosol	38.89	21.68
CDY63450	Canola	cytosol	38.1	21.24
CDX87707	Canola	cytosol	23.02	21.17
VIT_11s0052g00230.t01	Wine grape	cytosol	34.13	18.7
VIT_11s0052g00220.t01	Wine grape	cytosol	19.05	16.9
VIT_11s0052g00240.t01	Wine grape	cytosol	29.37	9.46
CDX96006	Canola	cytosol	0.79	0.75

Protein Annotations

Gene3D:1.10.3520.10	MapMan:5.4.6	GO:A0A078DEN4	EnsemblPlants:CDX87716	ProteinID:CDX87716	ProteinID:CDX87716.1
InterPro:GLTP_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0120009
GO:GO:0120013	EnsemblPlantsGene:GSBRNA2T00146745001	InterPro:Glycolipid_transfer_prot_dom	InterPro:IPR036497	PFAM:PF08718	PANTHER:PTHR10219
PANTHER:PTHR10219:SF28	SUPFAM:SSF110004	UniParc:UPI0004EBAC34	SEG:seg	:	:

Description

BnaC02g32330D

Coordinates

chrLK031851:-:356981..360998

Molecular Weight (calculated)

13960.0 Da

IEP (calculated)

6.504

GRAVY (calculated)

-0.002

Length

126 amino acids

Sequence
(BLAST)

001: MIDKDIEAGC VKKYGSHTRN LLKVKQGLEM IKVLCEELLA TEGDDSLKDA AIKAYNQVLF PHHQYNIQKA CATGLNSLPS KSLVLLLLGE AEETINVHLQ
101: SYVTASTPVI AYLDKLFLSK NLGIDW

Best Arabidopsis Sequence Match ( AT2G34690.1 )
(BLAST)

001: MADSEADKPL RKISAAFKKL AIIVNSPNPE VPVTQFSHAC SLVSPLFGCL GIAFKFAEMD YVAKVDDLVR ASSSISTLVV MMDKDIEADC VRKAGSHTRN
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW

Arabidopsis Description

ACD11Accelerated cell death 11 [Source:UniProtKB/Swiss-Prot;Acc:O64587]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.