Factsheet for TraesCS5D01G431800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G124100.1
TraesCS1B01G143000.1
TraesCS1D01G130300.1
TraesCS2A01G368500.1
TraesCS2B01G385700.2
TraesCS2D01G365300.2
TraesCS3A01G104300.1
TraesCS3B01G122600.1
TraesCS3D01G106500.1
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G300700.1
TraesCS7D01G296400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34690.1	TraesCS1A01G124100.1	AT1G55190.1	18845362
AT2G34690.1	TraesCS1B01G143000.1	AT1G55190.1	18845362
AT2G34690.1	TraesCS1D01G130300.1	AT1G55190.1	18845362
AT2G34690.1	TraesCS3A01G104300.1	AT1G55190.1	18845362
AT2G34690.1	TraesCS3B01G122600.1	AT1G55190.1	18845362
AT2G34690.1	TraesCS3D01G106500.1	AT1G55190.1	18845362
AT2G34690.1	TraesCS1A01G124100.1	AT3G13720.1	18845362
AT2G34690.1	TraesCS1B01G143000.1	AT3G13720.1	18845362
AT2G34690.1	TraesCS1D01G130300.1	AT3G13720.1	18845362
AT2G34690.1	TraesCS3A01G104300.1	AT3G13720.1	18845362
AT2G34690.1	TraesCS3B01G122600.1	AT3G13720.1	18845362
AT2G34690.1	TraesCS3D01G106500.1	AT3G13720.1	18845362
AT2G34690.1	TraesCS2A01G368500.1	AT3G60600.1	18845362
AT2G34690.1	TraesCS2B01G385700.2	AT3G60600.1	18845362
AT2G34690.1	TraesCS2D01G365300.2	AT3G60600.1	18845362
AT2G34690.1	TraesCS6A01G237600.1	AT3G60600.1	18845362
AT2G34690.1	TraesCS6B01G266100.1	AT3G60600.1	18845362
AT2G34690.1	TraesCS6D01G220300.1	AT3G60600.1	18845362
AT2G34690.1	TraesCS7A01G300700.1	AT3G60600.1	18845362
AT2G34690.1	TraesCS7D01G296400.1	AT3G60600.1	18845362

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G423200.1	Wheat	cytosol	99.04	100.0
Os03t0784900-01	Rice	cytosol	86.06	86.47
EER90780	Sorghum	cytosol	84.62	85.44
TraesCS5B01G425200.1	Wheat	cytosol	98.56	82.66
GSMUA_Achr5P02430_001	Banana	endoplasmic reticulum, extracellular	63.94	76.0
HORVU5Hr1G103320.2	Barley	nucleus, plastid	96.63	69.31
Zm00001d034346_P002	Maize	mitochondrion	84.13	67.83
KRH11758	Soybean	cytosol	66.83	66.83
KRH36758	Soybean	cytosol	64.9	65.53
AT2G34690.1	Thale cress	cytosol	64.42	65.05
Bra022985.1-P	Field mustard	cytosol	45.67	64.19
Solyc02g070250.2.1	Tomato	cytosol	63.94	63.33
CDX79572	Canola	cytosol	62.5	63.11
PGSC0003DMT400054370	Potato	cytosol	62.98	62.38
CDX84635	Canola	cytosol, endoplasmic reticulum, peroxisome	60.1	60.68
VIT_10s0003g04580.t01	Wine grape	cytosol	58.65	59.51
CDX84289	Canola	cytosol	28.37	56.73
CDX87716	Canola	cytosol	33.17	54.76
CDY43977	Canola	cytosol	33.17	54.76
Bra022038.1-P	Field mustard	cytosol	49.04	51.78
VIT_11s0052g00280.t01	Wine grape	cytosol	46.63	46.86
CDY43980	Canola	cytosol	44.71	46.27
Bra022041.1-P	Field mustard	cytosol	44.71	46.27
CDX87706	Canola	cytosol	19.23	45.98
VIT_11s0052g00260.t01	Wine grape	cytosol, plastid	43.27	43.69
TraesCS4D01G045300.1	Wheat	cytosol	47.12	42.98
VIT_11s0052g00220.t01	Wine grape	cytosol	25.48	37.32
CDX87707	Canola	cytosol	24.04	36.5
VIT_11s0052g00230.t01	Wine grape	cytosol	37.02	33.48
VIT_11s0052g00240.t01	Wine grape	cytosol	38.94	20.72

Protein Annotations

Gene3D:1.10.3520.10	MapMan:5.4.6	InterPro:GLTP_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006950	GO:GO:0008150
GO:GO:0008219	GO:GO:0009605	GO:GO:0009607	GO:GO:0009719	GO:GO:0009751	GO:GO:0009816
GO:GO:0009987	GO:GO:0010175	GO:GO:0016043	GO:GO:0120009	GO:GO:0120013	InterPro:Glycolipid_transfer_prot_dom
InterPro:IPR036497	PFAM:PF08718	PANTHER:PTHR10219	PANTHER:PTHR10219:SF28	SUPFAM:SSF110004	EnsemblPlantsGene:TraesCS5D01G431800
EnsemblPlants:TraesCS5D01G431800.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:488345841..488347856

Molecular Weight (calculated)

22707.4 Da

IEP (calculated)

9.686

GRAVY (calculated)

-0.132

Length

208 amino acids

Sequence
(BLAST)

001: MGSNEADKPL RRIGASFEQL AAVAKQQQPQ QPAMAAGDFS RACSNVSVLF GCLGIAFKFA EMDYVAKVND LLEASKTIST LPSMVELDIQ KGTVRQAGSH
101: TRNLLRVKRG IDMVKVLFEQ ILVTEGNSLK DAASKAYAQV FAPHHGWAIR KAVGAGMYAL PSKSQLLKKL NEDENSARAQ MQSFVRSSGP VILYVEDLFT
201: SKNLGLDW

Best Arabidopsis Sequence Match ( AT2G34690.1 )
(BLAST)

001: MADSEADKPL RKISAAFKKL AIIVNSPNPE VPVTQFSHAC SLVSPLFGCL GIAFKFAEMD YVAKVDDLVR ASSSISTLVV MMDKDIEADC VRKAGSHTRN
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW

Arabidopsis Description

ACD11Accelerated cell death 11 [Source:UniProtKB/Swiss-Prot;Acc:O64587]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.