Factsheet for Bra022985.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003423.1-P
Bra007547.1-P
Bra014355.1-P
Bra014481.1-P
Bra021502.1-P
Bra021503.1-P
Bra037983.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34690.1	Bra014355.1-P	AT1G55190.1	18845362
AT2G34690.1	Bra037983.1-P	AT1G55190.1	18845362
AT2G34690.1	Bra021502.1-P	AT3G13720.1	18845362
AT2G34690.1	Bra021503.1-P	AT3G13720.1	18845362
AT2G34690.1	Bra003423.1-P	AT3G60600.1	18845362
AT2G34690.1	Bra007547.1-P	AT3G60600.1	18845362
AT2G34690.1	Bra014481.1-P	AT3G60600.1	18845362

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84635	Canola	cytosol, endoplasmic reticulum, peroxisome	98.65	70.87
AT2G34690.1	Thale cress	cytosol	82.43	59.22
GSMUA_Achr5P02430_001	Banana	endoplasmic reticulum, extracellular	68.24	57.71
PGSC0003DMT400054370	Potato	cytosol	70.27	49.52
Solyc02g070250.2.1	Tomato	cytosol	70.27	49.52
KRH11758	Soybean	cytosol	69.59	49.52
VIT_10s0003g04580.t01	Wine grape	cytosol	66.89	48.29
KRH36758	Soybean	cytosol	66.89	48.06
EER90780	Sorghum	cytosol	66.22	47.57
Bra022038.1-P	Field mustard	cytosol	61.49	46.19
TraesCS5A01G423200.1	Wheat	cytosol	64.19	46.12
Os03t0784900-01	Rice	cytosol	64.19	45.89
TraesCS5D01G431800.1	Wheat	cytosol	64.19	45.67
Bra022041.1-P	Field mustard	cytosol	58.78	43.28
Zm00001d034346_P002	Maize	mitochondrion	66.89	38.37
TraesCS5B01G425200.1	Wheat	cytosol	64.19	38.31
VIT_11s0052g00260.t01	Wine grape	cytosol, plastid	50.0	35.92
VIT_11s0052g00280.t01	Wine grape	cytosol	45.27	32.37
HORVU5Hr1G103320.2	Barley	nucleus, plastid	62.16	31.72
VIT_11s0052g00220.t01	Wine grape	cytosol	27.7	28.87
Bra010670.1-P	Field mustard	cytosol	41.89	27.43
VIT_11s0052g00230.t01	Wine grape	cytosol	41.89	26.96
Bra033633.1-P	Field mustard	cytosol	41.22	26.87
Bra004321.1-P	Field mustard	cytosol	43.24	25.2
VIT_11s0052g00240.t01	Wine grape	cytosol	38.51	14.58

Protein Annotations

Gene3D:1.10.3520.10	MapMan:5.4.6	EnsemblPlantsGene:Bra022985	EnsemblPlants:Bra022985.1	EnsemblPlants:Bra022985.1-P	InterPro:GLTP_sf
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006950	GO:GO:0008150	GO:GO:0008219	GO:GO:0009605	GO:GO:0009607
GO:GO:0009719	GO:GO:0009751	GO:GO:0009816	GO:GO:0009987	GO:GO:0010175	GO:GO:0015695
GO:GO:0015791	GO:GO:0016043	GO:GO:0072488	GO:GO:0120009	GO:GO:0120013	InterPro:Glycolipid_transfer_prot_dom
InterPro:IPR036497	UniProt:M4E2I4	PFAM:PF08718	PANTHER:PTHR10219	PANTHER:PTHR10219:SF28	SUPFAM:SSF110004
UniParc:UPI000253FDB4	:	:	:	:	:

Description

AT2G34690 (E=3e-067) ACD11 | ACD11 (ACCELERATED CELL DEATH 11); sphingosine transmembrane transporter

Coordinates

chrA03:+:8098716..8099780

Molecular Weight (calculated)

16510.0 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.105

Length

148 amino acids

Sequence
(BLAST)

001: MDYVAKVEDL AKASSSVSTL VVMMERDIEA NCVRKAGSHT RNLLRVKRGL DMVKALFEEI IASEGDNSLK DPASKSYDQV FRPHHGWVIQ KAVALGMCAL
101: PTRSQLLTML NEEEAEAKIH MQSYVNASAP VIAYLDNLFL SRQLGIDW

Best Arabidopsis Sequence Match ( AT2G34690.1 )
(BLAST)

001: MADSEADKPL RKISAAFKKL AIIVNSPNPE VPVTQFSHAC SLVSPLFGCL GIAFKFAEMD YVAKVDDLVR ASSSISTLVV MMDKDIEADC VRKAGSHTRN
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW

Arabidopsis Description

ACD11Accelerated cell death 11 [Source:UniProtKB/Swiss-Prot;Acc:O64587]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.