Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- peroxisome 1
- extracellular 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc03g121460.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G34690.1 | Solyc03g121460.1.1 | AT1G55190.1 | 18845362 |
| AT2G34690.1 | Solyc03g121460.1.1 | AT3G13720.1 | 18845362 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400054370 | Potato | cytosol | 96.67 | 96.67 |
| Bra022985.1-P | Field mustard | cytosol | 49.52 | 70.27 |
| GSMUA_Achr5P02430_001 | Banana | endoplasmic reticulum, extracellular | 58.1 | 69.71 |
| KRH11758 | Soybean | cytosol | 68.1 | 68.75 |
| CDX79572 | Canola | cytosol | 67.14 | 68.45 |
| AT2G34690.1 | Thale cress | cytosol | 66.67 | 67.96 |
| KRH36758 | Soybean | cytosol | 66.19 | 67.48 |
| CDX84635 | Canola | cytosol, endoplasmic reticulum, peroxisome | 65.71 | 66.99 |
| VIT_10s0003g04580.t01 | Wine grape | cytosol | 64.76 | 66.34 |
| EER90780 | Sorghum | cytosol | 64.29 | 65.53 |
| TraesCS5A01G423200.1 | Wheat | cytosol | 63.33 | 64.56 |
| TraesCS5D01G431800.1 | Wheat | cytosol | 63.33 | 63.94 |
| Os03t0784900-01 | Rice | cytosol | 60.95 | 61.84 |
| CDX84289 | Canola | cytosol | 27.14 | 54.81 |
| TraesCS5B01G425200.1 | Wheat | cytosol | 62.86 | 53.23 |
| Zm00001d034346_P002 | Maize | mitochondrion | 64.29 | 52.33 |
| Bra022038.1-P | Field mustard | cytosol | 48.57 | 51.78 |
| CDY43977 | Canola | cytosol | 30.95 | 51.59 |
| CDX87716 | Canola | cytosol | 30.95 | 51.59 |
| VIT_11s0052g00280.t01 | Wine grape | cytosol | 49.05 | 49.76 |
| Solyc12g033130.1.1 | Tomato | cytosol | 48.57 | 49.51 |
| VIT_11s0052g00260.t01 | Wine grape | cytosol, plastid | 48.1 | 49.03 |
| CDY43980 | Canola | cytosol | 44.29 | 46.27 |
| Bra022041.1-P | Field mustard | cytosol | 44.29 | 46.27 |
| HORVU5Hr1G103320.2 | Barley | nucleus, plastid | 62.38 | 45.17 |
| VIT_11s0052g00220.t01 | Wine grape | cytosol | 28.1 | 41.55 |
| CDX87706 | Canola | cytosol | 16.67 | 40.23 |
| CDX87707 | Canola | cytosol | 25.71 | 39.42 |
| VIT_11s0052g00230.t01 | Wine grape | cytosol | 41.43 | 37.83 |
| VIT_11s0052g00240.t01 | Wine grape | cytosol | 40.48 | 21.74 |
Protein Annotations
| Gene3D:1.10.3520.10 | MapMan:5.4.6 | InterPro:GLTP_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008219 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009751 | GO:GO:0009816 |
| GO:GO:0009987 | GO:GO:0010175 | GO:GO:0015695 | GO:GO:0015791 | GO:GO:0016043 | GO:GO:0072488 |
| GO:GO:0120009 | GO:GO:0120013 | InterPro:Glycolipid_transfer_prot_dom | InterPro:IPR036497 | UniProt:K4B807 | PFAM:PF08718 |
| PANTHER:PTHR10219 | PANTHER:PTHR10219:SF28 | SUPFAM:SSF110004 | EnsemblPlantsGene:Solyc02g070250.2 | EnsemblPlants:Solyc02g070250.2.1 | UniParc:UPI000276867F |
Description
Accelerated cell death 11 [Source:Projected from Arabidopsis thaliana (AT2G34690) UniProtKB/Swiss-Prot;Acc:O64587]
Coordinates
chr2:-:40006149..40011332
Molecular Weight (calculated)
23484.3 Da
IEP (calculated)
7.030
GRAVY (calculated)
-0.192
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MANHVAEEKP LRKMAEAFKD LANTLNSQTL DEAAKMEVAP FSHACTLVSP LFRCLGIAFK FAELDYVAKV NDLAEASKSI TTLHTMMDQD IQANCVRKAG
101: SHTRNLLRVK RGLDMVKVLF EEIIASEGNS LKDPASKAYT QVFAPYHGWA IRKAVSAGMY ALPTRQQLMI KLNEDEDSAR TQMQNYVASC DTVILYIDKL
201: FTSRDLGTDW
101: SHTRNLLRVK RGLDMVKVLF EEIIASEGNS LKDPASKAYT QVFAPYHGWA IRKAVSAGMY ALPTRQQLMI KLNEDEDSAR TQMQNYVASC DTVILYIDKL
201: FTSRDLGTDW
001: MADSEADKPL RKISAAFKKL AIIVNSPNPE VPVTQFSHAC SLVSPLFGCL GIAFKFAEMD YVAKVDDLVR ASSSISTLVV MMDKDIEADC VRKAGSHTRN
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW
Arabidopsis Description
ACD11Accelerated cell death 11 [Source:UniProtKB/Swiss-Prot;Acc:O64587]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.