Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0196500-01 | |
| Os02t0643000-01 | |
| Os04t0534400-01 | |
| Os05t0200280-01 | |
| Os08t0156700-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G423200.1 | Wheat | cytosol | 86.47 | 86.89 |
| TraesCS5D01G431800.1 | Wheat | cytosol | 86.47 | 86.06 |
| EER90780 | Sorghum | cytosol | 85.02 | 85.44 |
| GSMUA_Achr5P02430_001 | Banana | endoplasmic reticulum, extracellular | 66.67 | 78.86 |
| TraesCS5B01G425200.1 | Wheat | cytosol | 86.96 | 72.58 |
| Zm00001d034346_P002 | Maize | mitochondrion | 84.54 | 67.83 |
| KRH11758 | Soybean | cytosol | 67.15 | 66.83 |
| KRH36758 | Soybean | cytosol | 64.25 | 64.56 |
| Bra022985.1-P | Field mustard | cytosol | 45.89 | 64.19 |
| CDX79572 | Canola | cytosol | 61.84 | 62.14 |
| AT2G34690.1 | Thale cress | cytosol | 61.35 | 61.65 |
| VIT_10s0003g04580.t01 | Wine grape | cytosol | 60.39 | 60.98 |
| Solyc02g070250.2.1 | Tomato | cytosol | 61.84 | 60.95 |
| CDX84635 | Canola | cytosol, endoplasmic reticulum, peroxisome | 60.39 | 60.68 |
| PGSC0003DMT400054370 | Potato | cytosol | 61.35 | 60.48 |
| HORVU5Hr1G103320.2 | Barley | nucleus, plastid | 84.54 | 60.34 |
| CDX84289 | Canola | cytosol | 28.02 | 55.77 |
| CDX87716 | Canola | cytosol | 31.88 | 52.38 |
| CDY43977 | Canola | cytosol | 31.88 | 52.38 |
| Bra022038.1-P | Field mustard | cytosol | 47.83 | 50.25 |
| VIT_11s0052g00280.t01 | Wine grape | cytosol | 47.34 | 47.34 |
| CDX87706 | Canola | cytosol | 19.81 | 47.13 |
| VIT_11s0052g00260.t01 | Wine grape | cytosol, plastid | 45.41 | 45.63 |
| CDY43980 | Canola | cytosol | 43.48 | 44.78 |
| Bra022041.1-P | Field mustard | cytosol | 43.48 | 44.78 |
| Os03t0710700-00 | Rice | cytosol | 46.38 | 41.38 |
| CDX87707 | Canola | cytosol | 23.19 | 35.04 |
| VIT_11s0052g00220.t01 | Wine grape | cytosol | 23.67 | 34.51 |
| VIT_11s0052g00230.t01 | Wine grape | cytosol | 35.27 | 31.74 |
| Os08t0556300-01 | Rice | cytosol | 32.37 | 31.16 |
| VIT_11s0052g00240.t01 | Wine grape | cytosol | 36.23 | 19.18 |
Protein Annotations
| Gene3D:1.10.3520.10 | EntrezGene:4334340 | MapMan:5.4.6 | ProteinID:ABF99223.1 | EMBL:AK060949 | EMBL:AK099097 |
| ProteinID:BAF13392.1 | ProteinID:BAS86719.1 | ProteinID:EEE60053.1 | InterPro:GLTP_sf | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008219 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009751 |
| GO:GO:0009816 | GO:GO:0009987 | GO:GO:0010175 | GO:GO:0015695 | GO:GO:0015791 | GO:GO:0016043 |
| GO:GO:0072488 | GO:GO:0120009 | GO:GO:0120013 | InterPro:Glycolipid_transfer_prot_dom | InterPro:IPR036497 | EnsemblPlantsGene:Os03g0784900 |
| EnsemblPlants:Os03t0784900-01 | PFAM:PF08718 | PANTHER:PTHR10219 | PANTHER:PTHR10219:SF28 | UniProt:Q10CF2 | SUPFAM:SSF110004 |
| UniParc:UPI0000DB4ED9 | RefSeq:XP_015628156.1 | : | : | : | : |
Description
Glycolipid transfer protein, GLTP domain containing protein. (Os03t0784900-01);Glycolipid transfer protein, GLTP domain containing protein. (Os03t0784900-02)
Coordinates
chr3:-:32582011..32584584
Molecular Weight (calculated)
22699.5 Da
IEP (calculated)
8.684
GRAVY (calculated)
-0.088
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSDGDKPL RRIAASFEEL EAVAKQQAPG PAMEVGSFAR ACSNVSVLFG CLGIAFKFAE MDYVAKVDDL LEASKSISKL PEMVELDIQK GTVRQAGSHT
101: RNMLRVKRGI DMVKILFEQI LVTEGNSLRD AASKAYAQVF APHHGWAIRK AVAAGMYALP SKSQLLKKLN EDENSAKVQM QTFIRASGPV ILYVEDLFTS
201: RNLGMDW
101: RNMLRVKRGI DMVKILFEQI LVTEGNSLRD AASKAYAQVF APHHGWAIRK AVAAGMYALP SKSQLLKKLN EDENSAKVQM QTFIRASGPV ILYVEDLFTS
201: RNLGMDW
001: MADSEADKPL RKISAAFKKL AIIVNSPNPE VPVTQFSHAC SLVSPLFGCL GIAFKFAEMD YVAKVDDLVR ASSSISTLVV MMDKDIEADC VRKAGSHTRN
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW
101: LLRVKRGLDM VKVLFEQIIA SEGDNSLKDP ATKSYAQVFA PHHGWAIRKA VSLGMYALPT RAHLLNMLKE DEAAAKIHMQ SYVNSSAPLI TYLDNLFLSK
201: QLGIDW
Arabidopsis Description
ACD11Accelerated cell death 11 [Source:UniProtKB/Swiss-Prot;Acc:O64587]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.