Factsheet for Os08t0505300-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038580.1-P	Field mustard	cytosol	74.24	68.06
KRH66370	Soybean	cytosol	66.67	61.11
GSMUA_Achr6P03460_001	Banana	cytosol	92.42	50.41
EES15405	Sorghum	cytosol	92.42	50.0
GSMUA_Achr3P03830_001	Banana	cytosol	90.91	49.59
HORVU7Hr1G050170.1	Barley	cytosol	90.91	49.18
TraesCS7D01G243500.1	Wheat	cytosol	90.91	49.18
TraesCS7B01G146600.1	Wheat	cytosol, unclear	90.91	49.18
TraesCS7A01G244800.1	Wheat	cytosol	90.91	49.18
GSMUA_Achr9P12560_001	Banana	cytosol	87.88	48.33
VIT_13s0064g01240.t01	Wine grape	cytosol	86.36	47.11
PGSC0003DMT400078454	Potato	cytosol	84.85	46.67
Os06t0319700-01	Rice	cytosol, nucleus, plasma membrane, plastid	86.36	45.97
Solyc05g008010.2.1	Tomato	cytosol, nucleus, unclear	83.33	45.83
CDY14309	Canola	cytosol	74.24	44.55
PGSC0003DMT400000921	Potato	cytosol	80.3	44.17
Solyc12g008720.1.1	Tomato	nucleus	80.3	44.17
CDY21651	Canola	cytosol	78.79	43.7
CDY48721	Canola	cytosol	78.79	43.7
CDY03347	Canola	cytosol	78.79	43.7
CDX82718	Canola	cytosol	78.79	43.7
Bra036709.1-P	Field mustard	cytosol	78.79	43.7
KRH41451	Soybean	cytosol, endoplasmic reticulum	78.79	43.33
KRH49031	Soybean	endoplasmic reticulum	78.79	43.33
KRH60160	Soybean	cytosol	78.79	43.33
KRH74177	Soybean	cytosol	78.79	43.33
CDY32877	Canola	cytosol	77.27	42.86
CDY41796	Canola	cytosol	77.27	42.86
Bra002798.1-P	Field mustard	cytosol	77.27	42.86
Bra026455.1-P	Field mustard	cytosol	77.27	42.86
Bra031094.1-P	Field mustard	cytosol	77.27	42.86
Bra035629.1-P	Field mustard	cytosol	77.27	42.86
CDX81941	Canola	cytosol	77.27	42.86
CDX88585	Canola	cytosol	77.27	42.86
CDY11907	Canola	cytosol	77.27	42.86
CDY20712	Canola	cytosol	77.27	42.86
CDY26343	Canola	cytosol	77.27	42.86
CDY32765	Canola	cytosol	77.27	42.86
CDY50008	Canola	cytosol	77.27	42.5
CDX94356	Canola	cytosol	75.76	42.02
CDX89354	Canola	cytosol	75.76	42.02
AT5G56710.1	Thale cress	cytosol	75.76	42.02
Bra039016.1-P	Field mustard	nucleus	74.24	41.88
Bra010436.1-P	Field mustard	cytosol	74.24	41.88
AT2G19740.1	Thale cress	cytosol	74.24	41.18
AT4G26230.1	Thale cress	cytosol	74.24	41.18
Bra006860.1-P	Field mustard	cytosol	72.73	40.34
VIT_11s0016g02650.t01	Wine grape	cytosol	83.33	36.18
KRH63209	Soybean	cytosol	15.15	8.77

Protein Annotations

Gene3D:3.10.440.10	MapMan:35.2	ProteinID:BAF24098.1	ProteinID:BAT06154.1	GO:GO:0002181	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	InterPro:IPR023621	EnsemblPlantsGene:Os08g0505300	EnsemblPlants:Os08t0505300-00
PFAM:PF01198	PANTHER:PTHR10956	PANTHER:PTHR10956:SF22	UniProt:Q0J4L7	InterPro:Ribosomal_L31e	InterPro:Ribosomal_L31e_dom_sf
SUPFAM:SSF54575	UniParc:UPI0000DD958C	SEG:seg	:	:	:

Description

Similar to 60S ribosomal protein L31. (Os08t0505300-00)

Coordinates

chr8:-:24993082..24993406

Molecular Weight (calculated)

7512.0 Da

IEP (calculated)

9.886

GRAVY (calculated)

-0.691

Length

66 amino acids

Sequence
(BLAST)

1: RVDVKLNKHI WSSGIRSVPR RVRVRIARKR NDEEDAKEEL YSLVTVAEVP PEGLKGLGTK VVDETD

Best Arabidopsis Sequence Match ( AT5G56710.1 )
(BLAST)

001: MSEKKGRKEE VITREYTINL HRRLHKCTFK KKAPKAIKEI RKFAEKAMGT KDVRVDVKLN KQIWSKGIRG PPRRIRVRVA RKRNDDEDAK EEFFSLVTVA
101: EIPAEGLSGL GTKVIEEED

Arabidopsis Description

RPL31C60S ribosomal protein L31-3 [Source:UniProtKB/Swiss-Prot;Acc:P51420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.