CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82718	Canola	cytosol	98.32	98.32
CDY48721	Canola	cytosol	98.32	98.32
CDY03347	Canola	cytosol	98.32	98.32
CDY21651	Canola	cytosol	98.32	98.32
CDX81941	Canola	cytosol	96.64	96.64
Bra038580.1-P	Field mustard	cytosol	57.14	94.44
CDY32765	Canola	cytosol	90.76	90.76
CDY41796	Canola	cytosol	90.76	90.76
CDY32877	Canola	cytosol	90.76	90.76
CDY20712	Canola	cytosol	90.76	90.76
CDY11907	Canola	cytosol	90.76	90.76
CDX88585	Canola	cytosol	90.76	90.76
CDX94356	Canola	cytosol	89.92	89.92
CDX89354	Canola	cytosol	89.92	89.92
CDY50008	Canola	cytosol	89.92	89.17
CDY14309	Canola	cytosol	80.67	87.27
Solyc12g008720.1.1	Tomato	nucleus	82.35	81.67
PGSC0003DMT400000921	Potato	cytosol	82.35	81.67
Solyc05g008010.2.1	Tomato	cytosol, nucleus, unclear	80.67	80.0
PGSC0003DMT400078454	Potato	cytosol	79.83	79.17
GSMUA_Achr3P03830_001	Banana	cytosol	79.83	78.51
GSMUA_Achr6P03460_001	Banana	cytosol	79.83	78.51
HORVU5Hr1G052980.2	Barley	cytosol	78.99	77.69
KRH60160	Soybean	cytosol	78.15	77.5
KRH49031	Soybean	endoplasmic reticulum	78.15	77.5
KRH74177	Soybean	cytosol	78.15	77.5
Os08t0505300-00	Rice	plasma membrane	42.86	77.27
KRH41451	Soybean	cytosol, endoplasmic reticulum	77.31	76.67
GSMUA_Achr9P12560_001	Banana	cytosol	76.47	75.83
EES15405	Sorghum	cytosol	77.31	75.41
Zm00001d045889_P002	Maize	cytosol, extracellular	77.31	74.19
EES05621	Sorghum	cytosol	76.47	73.98
Os06t0319700-01	Rice	cytosol, nucleus, plasma membrane, plastid	76.47	73.39
TraesCS7A01G244800.1	Wheat	cytosol	74.79	72.95
TraesCS7B01G146600.1	Wheat	cytosol, unclear	74.79	72.95
TraesCS7D01G243500.1	Wheat	cytosol	74.79	72.95
Zm00001d051662_P001	Maize	cytosol	73.95	69.29
VIT_11s0016g02650.t01	Wine grape	cytosol	82.35	64.47
KRH66370	Soybean	cytosol	37.82	62.5
TraesCS6B01G310100.1	Wheat	cytosol, unclear	61.34	59.35
TraesCS6D01G262100.1	Wheat	cytosol	61.34	59.35
Zm00001d017850_P001	Maize	cytosol, extracellular, mitochondrion	61.34	59.35
KRH63209	Soybean	cytosol	34.45	35.96

Protein Annotations

MapMan:17.1.2.1.32	Gene3D:3.10.440.10	GO:A0A078GNV5	UniProt:A0A078GNV5	EnsemblPlants:CDY26343	ProteinID:CDY26343
ProteinID:CDY26343.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00035083001	InterPro:IPR023621	PFAM:PD006030
PFAM:PF01198	ScanProsite:PS01144	PANTHER:PTHR10956	PANTHER:PTHR10956:SF22	InterPro:Ribosomal_L31e	InterPro:Ribosomal_L31e_CS
InterPro:Ribosomal_L31e_dom_sf	SMART:SM01380	SUPFAM:SSF54575	UniParc:UPI0004EEDA9B	SEG:seg	:

Description

BnaA03g60190DBnaA03g60190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNV5]

Coordinates

chrLK032188:-:364813..365303

Molecular Weight (calculated)

13725.6 Da

IEP (calculated)

10.472

GRAVY (calculated)

-0.803

Length

119 amino acids

Sequence
(BLAST)

001: MEKGKGRKEE IVTREYTINL YRRLHSCTFK KKAPNAIKEI RKFALKAMGT KDVRVDVKLN KQIWSRGIRG PPRRVRVHVA RKRNDDEDAK EEFYSLVTVA
101: EIPAEGLSGL GTKVIDEDE

Best Arabidopsis Sequence Match ( AT2G19740.1 )
(BLAST)

001: MEKGKGRKEE VVTREYTINL HRRLHSCTFK KKAPNAIKEI RKFALKAMGT KDVRVDVKLN KQIWSKGIRG PPRRIRVRVA RKRNDDEDAK EEFFSLVTVA
101: EIPAEGLSGL GTKVIEEEE

Arabidopsis Description

RPL31A60S ribosomal protein L31-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.