Factsheet for TraesCS7D01G243500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G050170.1	Barley	cytosol	100.0	100.0
TraesCS7B01G146600.1	Wheat	cytosol, unclear	100.0	100.0
TraesCS7A01G244800.1	Wheat	cytosol	100.0	100.0
Os08t0505300-00	Rice	plasma membrane	49.18	90.91
EES15405	Sorghum	cytosol	89.34	89.34
GSMUA_Achr3P03830_001	Banana	cytosol	81.15	81.82
GSMUA_Achr6P03460_001	Banana	cytosol	81.15	81.82
PGSC0003DMT400000921	Potato	cytosol	79.51	80.83
Solyc05g008010.2.1	Tomato	cytosol, nucleus, unclear	79.51	80.83
Solyc12g008720.1.1	Tomato	nucleus	79.51	80.83
VIT_13s0064g01240.t01	Wine grape	cytosol	79.51	80.17
PGSC0003DMT400078454	Potato	cytosol	78.69	80.0
GSMUA_Achr9P12560_001	Banana	cytosol	77.87	79.17
KRH74177	Soybean	cytosol	77.05	78.33
KRH60160	Soybean	cytosol	77.05	78.33
KRH49031	Soybean	endoplasmic reticulum	77.05	78.33
KRH41451	Soybean	cytosol, endoplasmic reticulum	76.23	77.5
CDY48721	Canola	cytosol	74.59	76.47
CDY21651	Canola	cytosol	74.59	76.47
CDY03347	Canola	cytosol	74.59	76.47
CDX82718	Canola	cytosol	74.59	76.47
CDX81941	Canola	cytosol	73.77	75.63
Bra036709.1-P	Field mustard	cytosol	73.77	75.63
Bra031094.1-P	Field mustard	cytosol	73.77	75.63
CDY50008	Canola	cytosol	73.77	75.0
CDY32877	Canola	cytosol	72.95	74.79
AT2G19740.1	Thale cress	cytosol	72.95	74.79
CDY32765	Canola	cytosol	72.95	74.79
CDY26343	Canola	cytosol	72.95	74.79
CDY20712	Canola	cytosol	72.95	74.79
CDY11907	Canola	cytosol	72.95	74.79
CDX88585	Canola	cytosol	72.95	74.79
CDY41796	Canola	cytosol	72.95	74.79
Bra002798.1-P	Field mustard	cytosol	72.95	74.79
Bra035629.1-P	Field mustard	cytosol	72.95	74.79
Bra026455.1-P	Field mustard	cytosol	72.95	74.79
CDX94356	Canola	cytosol	72.13	73.95
CDX89354	Canola	cytosol	72.13	73.95
CDY14309	Canola	cytosol	66.39	73.64
Bra010436.1-P	Field mustard	cytosol	70.49	73.5
AT5G56710.1	Thale cress	cytosol	71.31	73.11
AT4G26230.1	Thale cress	cytosol	70.49	72.27
Bra038580.1-P	Field mustard	cytosol	42.62	72.22
Bra006860.1-P	Field mustard	cytosol	69.67	71.43
TraesCS6D01G262100.1	Wheat	cytosol	67.21	66.67
KRH66370	Soybean	cytosol	37.7	63.89
VIT_11s0016g02650.t01	Wine grape	cytosol	77.87	62.5
Bra039016.1-P	Field mustard	nucleus	48.36	50.43
KRH63209	Soybean	cytosol	31.97	34.21

Protein Annotations

MapMan:17.1.2.1.32	Gene3D:3.10.440.10	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR023621	PFAM:PD006030
PFAM:PF01198	PANTHER:PTHR10956	PANTHER:PTHR10956:SF22	InterPro:Ribosomal_L31e	InterPro:Ribosomal_L31e_dom_sf	SMART:SM01380
SUPFAM:SSF54575	EnsemblPlantsGene:TraesCS7D01G243500	EnsemblPlants:TraesCS7D01G243500.1	TIGR:cd00463	SEG:seg	:

Description

No Description!

Coordinates

chr7D:-:209823888..209825300

Molecular Weight (calculated)

13814.8 Da

IEP (calculated)

10.656

GRAVY (calculated)

-0.693

Length

122 amino acids

Sequence
(BLAST)

001: MADKKGGAPR KEEVVTREYT VNLHKRLHGC TFKKKAPNAI KELRKFAQKA MGTTDVRIDV KLNKLIWSSG IRSVPRRVRV RIARRRNDEE DAKEELYSLV
101: TVAEVPAEGL KGLGTKVVDD TE

Best Arabidopsis Sequence Match ( AT2G19740.1 )
(BLAST)

001: MEKGKGRKEE VVTREYTINL HRRLHSCTFK KKAPNAIKEI RKFALKAMGT KDVRVDVKLN KQIWSKGIRG PPRRIRVRVA RKRNDDEDAK EEFFSLVTVA
101: EIPAEGLSGL GTKVIEEEE

Arabidopsis Description

RPL31A60S ribosomal protein L31-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.