Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026455.1-P | Field mustard | cytosol | 99.16 | 99.16 |
| CDY41796 | Canola | cytosol | 99.16 | 99.16 |
| CDY32877 | Canola | cytosol | 99.16 | 99.16 |
| CDY32765 | Canola | cytosol | 99.16 | 99.16 |
| CDY20712 | Canola | cytosol | 99.16 | 99.16 |
| CDY11907 | Canola | cytosol | 99.16 | 99.16 |
| CDX88585 | Canola | cytosol | 99.16 | 99.16 |
| CDX89354 | Canola | cytosol | 98.32 | 98.32 |
| CDY50008 | Canola | cytosol | 98.32 | 97.5 |
| AT4G26230.1 | Thale cress | cytosol | 95.8 | 95.8 |
| CDY14309 | Canola | cytosol | 88.24 | 95.45 |
| CDY21651 | Canola | cytosol | 91.6 | 91.6 |
| CDX82718 | Canola | cytosol | 91.6 | 91.6 |
| CDY48721 | Canola | cytosol | 91.6 | 91.6 |
| CDY03347 | Canola | cytosol | 91.6 | 91.6 |
| CDY26343 | Canola | cytosol | 89.92 | 89.92 |
| CDX81941 | Canola | cytosol | 89.92 | 89.92 |
| Solyc12g008720.1.1 | Tomato | nucleus | 84.87 | 84.17 |
| PGSC0003DMT400000921 | Potato | cytosol | 84.87 | 84.17 |
| PGSC0003DMT400078454 | Potato | cytosol | 83.19 | 82.5 |
| KRH74177 | Soybean | cytosol | 83.19 | 82.5 |
| KRH49031 | Soybean | endoplasmic reticulum | 83.19 | 82.5 |
| KRH60160 | Soybean | cytosol | 83.19 | 82.5 |
| Solyc05g008010.2.1 | Tomato | cytosol, nucleus, unclear | 82.35 | 81.67 |
| KRH41451 | Soybean | cytosol, endoplasmic reticulum | 82.35 | 81.67 |
| HORVU5Hr1G052980.2 | Barley | cytosol | 82.35 | 80.99 |
| GSMUA_Achr6P03460_001 | Banana | cytosol | 82.35 | 80.99 |
| GSMUA_Achr3P03830_001 | Banana | cytosol | 81.51 | 80.17 |
| GSMUA_Achr9P12560_001 | Banana | cytosol | 79.83 | 79.17 |
| EES15405 | Sorghum | cytosol | 78.15 | 76.23 |
| Os08t0505300-00 | Rice | plasma membrane | 42.02 | 75.76 |
| EES05621 | Sorghum | cytosol | 78.15 | 75.61 |
| Zm00001d045889_P002 | Maize | cytosol, extracellular | 75.63 | 72.58 |
| TraesCS7A01G244800.1 | Wheat | cytosol | 73.95 | 72.13 |
| TraesCS7B01G146600.1 | Wheat | cytosol, unclear | 73.95 | 72.13 |
| TraesCS7D01G243500.1 | Wheat | cytosol | 73.95 | 72.13 |
| Os06t0319700-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 74.79 | 71.77 |
| Zm00001d051662_P001 | Maize | cytosol | 76.47 | 71.65 |
| VIT_11s0016g02650.t01 | Wine grape | cytosol | 85.71 | 67.11 |
| KRH66370 | Soybean | cytosol | 40.34 | 66.67 |
| TraesCS6D01G262100.1 | Wheat | cytosol | 60.5 | 58.54 |
| Zm00001d017850_P001 | Maize | cytosol, extracellular, mitochondrion | 60.5 | 58.54 |
| TraesCS6B01G310100.1 | Wheat | cytosol, unclear | 60.5 | 58.54 |
| KRH63209 | Soybean | cytosol | 36.13 | 37.72 |
Protein Annotations
| MapMan:17.1.2.1.32 | Gene3D:3.10.440.10 | GO:A0A078DYQ8 | EnsemblPlants:CDX94356 | ProteinID:CDX94356 | ProteinID:CDX94356.1 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00157470001 | InterPro:IPR023621 | PFAM:PD006030 | PFAM:PF01198 |
| ScanProsite:PS01144 | PANTHER:PTHR10956 | PANTHER:PTHR10956:SF0 | InterPro:Ribosomal_L31e | InterPro:Ribosomal_L31e_CS | InterPro:Ribosomal_L31e_dom_sf |
| SMART:SM01380 | SUPFAM:SSF54575 | UniParc:UPI0004EE9D4E | SEG:seg | : | : |
Description
BnaC01g18280D
Coordinates
chrLK031881:+:441737..442467
Molecular Weight (calculated)
13732.7 Da
IEP (calculated)
10.790
GRAVY (calculated)
-0.798
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEKKGRKEE VVTREYTINL HRRLHSCTFK KKAPKAIKEI RKFAEKAMGT KDVRVDVKLN KQIWSRGIRG PPRRIRVRVA RKRNDDEDAK EEFFSLVTVA
101: VIPAEGLSGL GTKVIDEED
101: VIPAEGLSGL GTKVIDEED
001: MEKGKGRKEE VVTREYTINL HRRLHSCTFK KKAPNAIKEI RKFALKAMGT KDVRVDVKLN KQIWSKGIRG PPRRIRVRVA RKRNDDEDAK EEFFSLVTVA
101: EIPAEGLSGL GTKVIEEEE
101: EIPAEGLSGL GTKVIEEEE
Arabidopsis Description
RPL31A60S ribosomal protein L31-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLL7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.