Factsheet for HORVU5Hr1G052980.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0064g01240.t01	Wine grape	cytosol	87.6	87.6
Solyc12g008720.1.1	Tomato	nucleus	86.78	87.5
PGSC0003DMT400078454	Potato	cytosol	86.78	87.5
PGSC0003DMT400000921	Potato	cytosol	86.78	87.5
KRH60160	Soybean	cytosol	86.78	87.5
Solyc05g008010.2.1	Tomato	cytosol, nucleus, unclear	85.95	86.67
KRH74177	Soybean	cytosol	85.95	86.67
KRH49031	Soybean	endoplasmic reticulum	85.95	86.67
KRH41451	Soybean	cytosol, endoplasmic reticulum	85.12	85.83
CDY20712	Canola	cytosol	81.82	83.19
CDY41796	Canola	cytosol	81.82	83.19
CDY32877	Canola	cytosol	81.82	83.19
CDY32765	Canola	cytosol	81.82	83.19
CDY11907	Canola	cytosol	81.82	83.19
CDX88585	Canola	cytosol	81.82	83.19
Bra002798.1-P	Field mustard	cytosol	81.82	83.19
Bra026455.1-P	Field mustard	cytosol	81.82	83.19
Bra035629.1-P	Field mustard	cytosol	81.82	83.19
CDY50008	Canola	cytosol	81.82	82.5
CDX89354	Canola	cytosol	80.99	82.35
AT5G56710.1	Thale cress	cytosol	80.99	82.35
CDX94356	Canola	cytosol	80.99	82.35
AT4G26230.1	Thale cress	cytosol	80.17	81.51
Bra031094.1-P	Field mustard	cytosol	80.17	81.51
Bra010436.1-P	Field mustard	cytosol	78.51	81.2
CDY14309	Canola	cytosol	73.55	80.91
CDY48721	Canola	cytosol	79.34	80.67
Bra036709.1-P	Field mustard	cytosol	79.34	80.67
CDY21651	Canola	cytosol	79.34	80.67
CDX82718	Canola	cytosol	79.34	80.67
CDY03347	Canola	cytosol	79.34	80.67
CDX81941	Canola	cytosol	79.34	80.67
AT2G19740.1	Thale cress	cytosol	78.51	79.83
Bra006860.1-P	Field mustard	cytosol	77.69	78.99
CDY26343	Canola	cytosol	77.69	78.99
HORVU7Hr1G050170.1	Barley	cytosol	79.34	78.69
Bra038580.1-P	Field mustard	cytosol	44.63	75.0
KRH66370	Soybean	cytosol	41.32	69.44
HORVU6Hr1G070670.1	Barley	cytosol	64.46	53.42
Bra039016.1-P	Field mustard	nucleus	49.59	51.28
KRH63209	Soybean	cytosol	35.54	37.72

Protein Annotations

MapMan:17.1.2.1.32	Gene3D:3.10.440.10	UniProt:A0A287R865	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU5Hr1G052980
EnsemblPlants:HORVU5Hr1G052980.2	InterPro:IPR023621	PFAM:PD006030	PFAM:PF01198	ScanProsite:PS01144	PANTHER:PTHR10956
PANTHER:PTHR10956:SF22	InterPro:Ribosomal_L31e	InterPro:Ribosomal_L31e_CS	InterPro:Ribosomal_L31e_dom_sf	SMART:SM01380	SUPFAM:SSF54575
UniParc:UPI000B4829B1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:415246169..415248284

Molecular Weight (calculated)

14045.1 Da

IEP (calculated)

10.655

GRAVY (calculated)

-0.783

Length

121 amino acids

Sequence
(BLAST)

001: MVEKTSRGRK EEVVTREYTI NLHKRLHGCT FKKKAPKAIK EIRKFAQNAM GTTDVRVDVK LNKLIWSRGI RSVPRRIRVR IARKRNDEED AKEELYSLVT
101: VTEIPPEGLK GLSTKVIEED D

Best Arabidopsis Sequence Match ( AT5G56710.1 )
(BLAST)

001: MSEKKGRKEE VITREYTINL HRRLHKCTFK KKAPKAIKEI RKFAEKAMGT KDVRVDVKLN KQIWSKGIRG PPRRIRVRVA RKRNDDEDAK EEFFSLVTVA
101: EIPAEGLSGL GTKVIEEED

Arabidopsis Description

RPL31C60S ribosomal protein L31-3 [Source:UniProtKB/Swiss-Prot;Acc:P51420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.