Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
endoplasmic reticulum: 27224218 endoplasmic reticulum: 28499913 mitochondrion: 28499913 |
msms PMID:
21132161
doi
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74177 | Soybean | cytosol | 100.0 | 100.0 |
| KRH41451 | Soybean | cytosol, endoplasmic reticulum | 98.33 | 98.33 |
| KRH60160 | Soybean | cytosol | 97.5 | 97.5 |
| Solyc12g008720.1.1 | Tomato | nucleus | 87.5 | 87.5 |
| PGSC0003DMT400000921 | Potato | cytosol | 87.5 | 87.5 |
| HORVU5Hr1G052980.2 | Barley | cytosol | 86.67 | 85.95 |
| GSMUA_Achr6P03460_001 | Banana | cytosol | 86.67 | 85.95 |
| PGSC0003DMT400078454 | Potato | cytosol | 85.83 | 85.83 |
| Solyc05g008010.2.1 | Tomato | cytosol, nucleus, unclear | 85.0 | 85.0 |
| GSMUA_Achr3P03830_001 | Banana | cytosol | 85.0 | 84.3 |
| Bra035629.1-P | Field mustard | cytosol | 83.33 | 84.03 |
| CDY41796 | Canola | cytosol | 83.33 | 84.03 |
| CDY32877 | Canola | cytosol | 83.33 | 84.03 |
| CDY32765 | Canola | cytosol | 83.33 | 84.03 |
| CDY20712 | Canola | cytosol | 83.33 | 84.03 |
| CDY11907 | Canola | cytosol | 83.33 | 84.03 |
| CDX88585 | Canola | cytosol | 83.33 | 84.03 |
| Bra002798.1-P | Field mustard | cytosol | 83.33 | 84.03 |
| Bra026455.1-P | Field mustard | cytosol | 83.33 | 84.03 |
| KRH66370 | Soybean | cytosol | 50.0 | 83.33 |
| CDX94356 | Canola | cytosol | 82.5 | 83.19 |
| CDX89354 | Canola | cytosol | 82.5 | 83.19 |
| CDY50008 | Canola | cytosol | 82.5 | 82.5 |
| AT5G56710.1 | Thale cress | cytosol | 81.67 | 82.35 |
| GSMUA_Achr9P12560_001 | Banana | cytosol | 81.67 | 81.67 |
| AT4G26230.1 | Thale cress | cytosol | 80.83 | 81.51 |
| EES05621 | Sorghum | cytosol | 83.33 | 81.3 |
| Bra010436.1-P | Field mustard | cytosol | 79.17 | 81.2 |
| CDY14309 | Canola | cytosol | 74.17 | 80.91 |
| CDY48721 | Canola | cytosol | 79.17 | 79.83 |
| CDY21651 | Canola | cytosol | 79.17 | 79.83 |
| CDY03347 | Canola | cytosol | 79.17 | 79.83 |
| CDX82718 | Canola | cytosol | 79.17 | 79.83 |
| AT2G19740.1 | Thale cress | cytosol | 79.17 | 79.83 |
| Bra006860.1-P | Field mustard | cytosol | 79.17 | 79.83 |
| Bra036709.1-P | Field mustard | cytosol | 79.17 | 79.83 |
| EES15405 | Sorghum | cytosol | 80.83 | 79.51 |
| Bra031094.1-P | Field mustard | cytosol | 78.33 | 78.99 |
| Os08t0505300-00 | Rice | plasma membrane | 43.33 | 78.79 |
| Zm00001d045889_P002 | Maize | cytosol, extracellular | 80.83 | 78.23 |
| CDY26343 | Canola | cytosol | 77.5 | 78.15 |
| CDX81941 | Canola | cytosol | 77.5 | 78.15 |
| Os06t0319700-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 80.0 | 77.42 |
| Zm00001d051662_P001 | Maize | cytosol | 81.67 | 77.17 |
| TraesCS7A01G244800.1 | Wheat | cytosol | 78.33 | 77.05 |
| TraesCS7B01G146600.1 | Wheat | cytosol, unclear | 78.33 | 77.05 |
| TraesCS7D01G243500.1 | Wheat | cytosol | 78.33 | 77.05 |
| Bra038580.1-P | Field mustard | cytosol | 42.5 | 70.83 |
| VIT_11s0016g02650.t01 | Wine grape | cytosol | 87.5 | 69.08 |
| TraesCS6B01G310100.1 | Wheat | cytosol, unclear | 65.0 | 63.41 |
| TraesCS6D01G262100.1 | Wheat | cytosol | 65.0 | 63.41 |
| Zm00001d017850_P001 | Maize | cytosol, extracellular, mitochondrion | 64.17 | 62.6 |
| Bra039016.1-P | Field mustard | nucleus | 46.67 | 47.86 |
| KRH63209 | Soybean | cytosol | 40.0 | 42.11 |
Protein Annotations
| EntrezGene:100305583 | EntrezGene:100810835 | MapMan:17.1.2.1.32 | Gene3D:3.10.440.10 | EMBL:ACUP02000007 | EMBL:ACUP02004330 |
| EMBL:BT089255 | UniProt:C6SVR2 | EnsemblPlantsGene:GLYMA_07G127500 | GO:GO:0002181 | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0022625 | InterPro:IPR023621 | EnsemblPlants:KRH49031 | ProteinID:KRH49031 | ProteinID:KRH49031.1 |
| ProteinID:KRH74177.1 | ProteinID:KRH74178.1 | PFAM:PD006030 | PFAM:PF01198 | ScanProsite:PS01144 | PANTHER:PTHR10956 |
| InterPro:Ribosomal_L31e | InterPro:Ribosomal_L31e_CS | InterPro:Ribosomal_L31e_dom_sf | SMART:SM01380 | SUPFAM:SSF54575 | UniParc:UPI0001B15831 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:15266530..15267960
Molecular Weight (calculated)
13948.0 Da
IEP (calculated)
10.544
GRAVY (calculated)
-0.787
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEKAKGRKE EVVTREYTIN LHKRLHGCTF KKKAPKAIKE IRKFAQKAMG TNDVRVDVKL NKFVWSQGIR SVPRRIRVRI ARKRNDDEDA KEELYSLVTV
101: VEIPKDELKG LGTKVIDDED
101: VEIPKDELKG LGTKVIDDED
001: MEKGKGRKEE VVTREYTINL HRRLHSCTFK KKAPNAIKEI RKFALKAMGT KDVRVDVKLN KQIWSKGIRG PPRRIRVRVA RKRNDDEDAK EEFFSLVTVA
101: EIPAEGLSGL GTKVIEEEE
101: EIPAEGLSGL GTKVIEEEE
Arabidopsis Description
RPL31A60S ribosomal protein L31-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLL7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.