CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051662_P001	Maize	cytosol	95.12	92.13
EES15405	Sorghum	cytosol	89.43	90.16
GSMUA_Achr6P03460_001	Banana	cytosol	85.37	86.78
PGSC0003DMT400078454	Potato	cytosol	84.55	86.67
Solyc05g008010.2.1	Tomato	cytosol, nucleus, unclear	83.74	85.83
VIT_13s0064g01240.t01	Wine grape	cytosol	83.74	85.12
GSMUA_Achr3P03830_001	Banana	cytosol	83.74	85.12
Solyc12g008720.1.1	Tomato	nucleus	82.93	85.0
PGSC0003DMT400000921	Potato	cytosol	82.93	85.0
GSMUA_Achr9P12560_001	Banana	cytosol	82.11	84.17
KRH49031	Soybean	endoplasmic reticulum	81.3	83.33
KRH60160	Soybean	cytosol	81.3	83.33
KRH74177	Soybean	cytosol	81.3	83.33
KRH41451	Soybean	cytosol, endoplasmic reticulum	80.49	82.5
CDY32877	Canola	cytosol	76.42	78.99
CDY41796	Canola	cytosol	76.42	78.99
AT2G19740.1	Thale cress	cytosol	76.42	78.99
CDY32765	Canola	cytosol	76.42	78.99
CDY20712	Canola	cytosol	76.42	78.99
CDY11907	Canola	cytosol	76.42	78.99
AT5G56710.1	Thale cress	cytosol	76.42	78.99
Bra002798.1-P	Field mustard	cytosol	76.42	78.99
Bra026455.1-P	Field mustard	cytosol	76.42	78.99
Bra031094.1-P	Field mustard	cytosol	76.42	78.99
Bra035629.1-P	Field mustard	cytosol	76.42	78.99
CDX81941	Canola	cytosol	76.42	78.99
CDX88585	Canola	cytosol	76.42	78.99
AT4G26230.1	Thale cress	cytosol	75.61	78.15
CDX82718	Canola	cytosol	75.61	78.15
CDY48721	Canola	cytosol	75.61	78.15
CDY21651	Canola	cytosol	75.61	78.15
CDY03347	Canola	cytosol	75.61	78.15
CDX94356	Canola	cytosol	75.61	78.15
CDX89354	Canola	cytosol	75.61	78.15
CDY50008	Canola	cytosol	75.61	77.5
Bra036709.1-P	Field mustard	cytosol	74.8	77.31
CDY26343	Canola	cytosol	73.98	76.47
Bra010436.1-P	Field mustard	cytosol	72.36	76.07
Bra006860.1-P	Field mustard	cytosol	73.17	75.63
CDY14309	Canola	cytosol	67.48	75.45
Zm00001d017850_P001	Maize	cytosol, extracellular, mitochondrion	73.98	73.98
TraesCS6B01G310100.1	Wheat	cytosol, unclear	72.36	72.36
TraesCS6D01G262100.1	Wheat	cytosol	72.36	72.36
Bra038580.1-P	Field mustard	cytosol	42.28	72.22
KRH66370	Soybean	cytosol	40.65	69.44
VIT_11s0016g02650.t01	Wine grape	cytosol	82.93	67.11
HORVU6Hr1G070670.1	Barley	cytosol	72.36	60.96
Bra039016.1-P	Field mustard	nucleus	47.15	49.57
KRH63209	Soybean	cytosol	32.52	35.09

Protein Annotations

MapMan:17.1.2.1.32	Gene3D:3.10.440.10	EntrezGene:8077729	UniProt:C5XZV4	EnsemblPlants:EES05621	ProteinID:EES05621
ProteinID:EES05621.1	GO:GO:0002181	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625
InterPro:IPR023621	PFAM:PD006030	PFAM:PF01198	PANTHER:PTHR10956	PANTHER:PTHR10956:SF22	InterPro:Ribosomal_L31e
InterPro:Ribosomal_L31e_dom_sf	SMART:SM01380	EnsemblPlantsGene:SORBI_3004G259700	SUPFAM:SSF54575	unigene:Sbi.8958	UniParc:UPI0001A85D11
RefSeq:XP_002452645.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:60491179..60492952

Molecular Weight (calculated)

14081.1 Da

IEP (calculated)

10.655

GRAVY (calculated)

-0.814

Length

123 amino acids

Sequence
(BLAST)

001: MAERKRGAGT RKDEVVTREY TINLHKRLHG CTFKKKAPNA IKEIRKFAQK AMGTTDVRID VKLNKHIWSS GIRSVPRRVR VRIARKRNDE EDAKEELYSL
101: VTVAEIPPEG LKGLGTKVVE DED

Best Arabidopsis Sequence Match ( AT2G19740.1 )
(BLAST)

001: MEKGKGRKEE VVTREYTINL HRRLHSCTFK KKAPNAIKEI RKFALKAMGT KDVRVDVKLN KQIWSKGIRG PPRRIRVRVA RKRNDDEDAK EEFFSLVTVA
101: EIPAEGLSGL GTKVIEEEE

Arabidopsis Description

RPL31A60S ribosomal protein L31-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.