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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • plastid 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os08t0505300-00 Rice plasma membrane 50.0 92.42
EES05621 Sorghum cytosol 90.16 89.43
TraesCS7D01G243500.1 Wheat cytosol 89.34 89.34
TraesCS7B01G146600.1 Wheat cytosol, unclear 89.34 89.34
TraesCS7A01G244800.1 Wheat cytosol 89.34 89.34
HORVU7Hr1G050170.1 Barley cytosol 89.34 89.34
GSMUA_Achr6P03460_001 Banana cytosol 85.25 85.95
GSMUA_Achr3P03830_001 Banana cytosol 84.43 85.12
PGSC0003DMT400078454 Potato cytosol 82.79 84.17
Solyc05g008010.2.1 Tomato cytosol, nucleus, unclear 81.97 83.33
GSMUA_Achr9P12560_001 Banana cytosol 81.97 83.33
VIT_13s0064g01240.t01 Wine grape cytosol 81.97 82.64
Solyc12g008720.1.1 Tomato nucleus 81.15 82.5
PGSC0003DMT400000921 Potato cytosol 81.15 82.5
KRH60160 Soybean cytosol 79.51 80.83
KRH49031 Soybean endoplasmic reticulum 79.51 80.83
KRH74177 Soybean cytosol 79.51 80.83
KRH41451 Soybean cytosol, endoplasmic reticulum 78.69 80.0
CDY50008 Canola cytosol 77.87 79.17
CDY32877 Canola cytosol 77.05 78.99
CDY48721 Canola cytosol 77.05 78.99
CDY41796 Canola cytosol 77.05 78.99
CDY32765 Canola cytosol 77.05 78.99
CDX82718 Canola cytosol 77.05 78.99
Bra026455.1-P Field mustard cytosol 77.05 78.99
Bra035629.1-P Field mustard cytosol 77.05 78.99
Bra002798.1-P Field mustard cytosol 77.05 78.99
CDX88585 Canola cytosol 77.05 78.99
CDY03347 Canola cytosol 77.05 78.99
CDY11907 Canola cytosol 77.05 78.99
CDY20712 Canola cytosol 77.05 78.99
CDY21651 Canola cytosol 77.05 78.99
CDX94356 Canola cytosol 76.23 78.15
CDX89354 Canola cytosol 76.23 78.15
CDX81941 Canola cytosol 76.23 78.15
Bra036709.1-P Field mustard cytosol 76.23 78.15
Bra031094.1-P Field mustard cytosol 76.23 78.15
AT2G19740.1 Thale cress cytosol 76.23 78.15
Bra010436.1-P Field mustard cytosol 74.59 77.78
CDY26343 Canola cytosol 75.41 77.31
AT5G56710.1 Thale cress cytosol 75.41 77.31
CDY14309 Canola cytosol 69.67 77.27
AT4G26230.1 Thale cress cytosol 74.59 76.47
Bra006860.1-P Field mustard cytosol 73.77 75.63
Bra038580.1-P Field mustard cytosol 44.26 75.0
VIT_11s0016g02650.t01 Wine grape cytosol 83.61 67.11
KRH66370 Soybean cytosol 39.34 66.67
Bra039016.1-P Field mustard nucleus 50.82 52.99
KRH63209 Soybean cytosol 31.97 34.21
Protein Annotations
MapMan:17.1.2.1.32Gene3D:3.10.440.10EntrezGene:8064036UniProt:C5YIT9EnsemblPlants:EES15405ProteinID:EES15405
ProteinID:EES15405.1GO:GO:0002181GO:GO:0003674GO:GO:0003735GO:GO:0005198GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0005840GO:GO:0006412
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0019538GO:GO:0022625
InterPro:IPR023621PFAM:PD006030PFAM:PF01198PANTHER:PTHR10956PANTHER:PTHR10956:SF22InterPro:Ribosomal_L31e
InterPro:Ribosomal_L31e_dom_sfSMART:SM01380EnsemblPlantsGene:SORBI_3007G211700SUPFAM:SSF54575unigene:Sbi.15085UniParc:UPI0001A87A3D
RefSeq:XP_002445910.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr7:-:64054614..64056228
Molecular Weight (calculated)
13810.8 Da
IEP (calculated)
10.656
GRAVY (calculated)
-0.692
Length
122 amino acids
Sequence
(BLAST)
001: MADRKGGAAR KEEVVTREYT INLHKRLHGC TFKKKAPNAV KEIRKFAQKA MGTTDVRIDV KLNKHIWSSG IRSVPRRVRV RIARKRNDEE DAKEELYSLV
101: TVAEIPAEGL KGLGTKVIDE AD
Best Arabidopsis Sequence Match ( AT5G56710.1 )
(BLAST)
001: MSEKKGRKEE VITREYTINL HRRLHKCTFK KKAPKAIKEI RKFAEKAMGT KDVRVDVKLN KQIWSKGIRG PPRRIRVRVA RKRNDDEDAK EEFFSLVTVA
101: EIPAEGLSGL GTKVIEEED
Arabidopsis Description
RPL31C60S ribosomal protein L31-3 [Source:UniProtKB/Swiss-Prot;Acc:P51420]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.