Factsheet for Bra039016.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038580.1-P	Field mustard	cytosol	53.85	87.5
Os08t0505300-00	Rice	plasma membrane	41.88	74.24
Bra036709.1-P	Field mustard	cytosol	58.97	57.98
Bra031094.1-P	Field mustard	cytosol	58.12	57.14
Bra026455.1-P	Field mustard	cytosol	56.41	55.46
Bra035629.1-P	Field mustard	cytosol	56.41	55.46
Bra002798.1-P	Field mustard	cytosol	56.41	55.46
KRH66370	Soybean	cytosol	33.33	54.17
Bra010436.1-P	Field mustard	cytosol	53.85	53.85
Bra006860.1-P	Field mustard	cytosol	52.99	52.1
Solyc12g008720.1.1	Tomato	nucleus	52.14	50.83
PGSC0003DMT400000921	Potato	cytosol	52.14	50.83
EES15405	Sorghum	cytosol	52.99	50.82
GSMUA_Achr6P03460_001	Banana	cytosol	51.28	49.59
HORVU5Hr1G052980.2	Barley	cytosol	51.28	49.59
Solyc05g008010.2.1	Tomato	cytosol, nucleus, unclear	50.43	49.17
TraesCS7D01G243500.1	Wheat	cytosol	50.43	48.36
TraesCS7A01G244800.1	Wheat	cytosol	50.43	48.36
TraesCS7B01G146600.1	Wheat	cytosol, unclear	50.43	48.36
PGSC0003DMT400078454	Potato	cytosol	49.57	48.33
GSMUA_Achr3P03830_001	Banana	cytosol	49.57	47.93
Zm00001d045889_P002	Maize	cytosol, extracellular	50.43	47.58
EES05621	Sorghum	cytosol	49.57	47.15
Os06t0319700-01	Rice	cytosol, nucleus, plasma membrane, plastid	49.57	46.77
KRH74177	Soybean	cytosol	47.86	46.67
KRH60160	Soybean	cytosol	47.86	46.67
KRH49031	Soybean	endoplasmic reticulum	47.86	46.67
KRH41451	Soybean	cytosol, endoplasmic reticulum	47.86	46.67
GSMUA_Achr9P12560_001	Banana	cytosol	47.86	46.67
Zm00001d051662_P001	Maize	cytosol	48.72	44.88
TraesCS6D01G262100.1	Wheat	cytosol	41.88	39.84
Zm00001d017850_P001	Maize	cytosol, extracellular, mitochondrion	41.88	39.84
TraesCS6B01G310100.1	Wheat	cytosol, unclear	41.88	39.84
VIT_11s0016g02650.t01	Wine grape	cytosol	51.28	39.47
KRH63209	Soybean	cytosol	11.11	11.4

Protein Annotations

Gene3D:3.10.440.10	MapMan:35.2	EnsemblPlantsGene:Bra039016	EnsemblPlants:Bra039016.1	EnsemblPlants:Bra039016.1-P	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR023621	UniProt:M4FD46	PFAM:PF01198	PANTHER:PTHR10956	PANTHER:PTHR10956:SF22
InterPro:Ribosomal_L31e	InterPro:Ribosomal_L31e_dom_sf	SMART:SM01380	SUPFAM:SSF54575	UniParc:UPI0002541004	SEG:seg

Description

AT2G19740 (E=5e-012) | 60S ribosomal protein L31 (RPL31A)

Coordinates

chrA07:-:794156..795132

Molecular Weight (calculated)

13253.3 Da

IEP (calculated)

5.404

GRAVY (calculated)

-1.181

Length

117 amino acids

Sequence
(BLAST)

001: MAKESSGGGG GEAEQEEEER WRKRDDKDTK GRTGCGAGWE KTTHAAEKIR FRVDVKLNKQ IWSRGIRGPP RRVRVYVARK RNDDEDDKEE FYSLVTVAEI
101: PAEGLSSLGT KVIDEDE

Best Arabidopsis Sequence Match ( AT2G19740.1 )
(BLAST)

001: MEKGKGRKEE VVTREYTINL HRRLHSCTFK KKAPNAIKEI RKFALKAMGT KDVRVDVKLN KQIWSKGIRG PPRRIRVRVA RKRNDDEDAK EEFFSLVTVA
101: EIPAEGLSGL GTKVIEEEE

Arabidopsis Description

RPL31A60S ribosomal protein L31-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.