CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49031	Soybean	endoplasmic reticulum	100.0	100.0
KRH41451	Soybean	cytosol, endoplasmic reticulum	98.33	98.33
KRH60160	Soybean	cytosol	97.5	97.5
Solyc12g008720.1.1	Tomato	nucleus	87.5	87.5
PGSC0003DMT400000921	Potato	cytosol	87.5	87.5
HORVU5Hr1G052980.2	Barley	cytosol	86.67	85.95
GSMUA_Achr6P03460_001	Banana	cytosol	86.67	85.95
PGSC0003DMT400078454	Potato	cytosol	85.83	85.83
Solyc05g008010.2.1	Tomato	cytosol, nucleus, unclear	85.0	85.0
GSMUA_Achr3P03830_001	Banana	cytosol	85.0	84.3
Bra035629.1-P	Field mustard	cytosol	83.33	84.03
CDY41796	Canola	cytosol	83.33	84.03
CDY32877	Canola	cytosol	83.33	84.03
CDY32765	Canola	cytosol	83.33	84.03
CDY20712	Canola	cytosol	83.33	84.03
CDY11907	Canola	cytosol	83.33	84.03
CDX88585	Canola	cytosol	83.33	84.03
Bra002798.1-P	Field mustard	cytosol	83.33	84.03
Bra026455.1-P	Field mustard	cytosol	83.33	84.03
KRH66370	Soybean	cytosol	50.0	83.33
CDX94356	Canola	cytosol	82.5	83.19
CDX89354	Canola	cytosol	82.5	83.19
CDY50008	Canola	cytosol	82.5	82.5
AT5G56710.1	Thale cress	cytosol	81.67	82.35
GSMUA_Achr9P12560_001	Banana	cytosol	81.67	81.67
AT4G26230.1	Thale cress	cytosol	80.83	81.51
EES05621	Sorghum	cytosol	83.33	81.3
Bra010436.1-P	Field mustard	cytosol	79.17	81.2
CDY14309	Canola	cytosol	74.17	80.91
CDY48721	Canola	cytosol	79.17	79.83
CDY21651	Canola	cytosol	79.17	79.83
CDY03347	Canola	cytosol	79.17	79.83
CDX82718	Canola	cytosol	79.17	79.83
AT2G19740.1	Thale cress	cytosol	79.17	79.83
Bra006860.1-P	Field mustard	cytosol	79.17	79.83
Bra036709.1-P	Field mustard	cytosol	79.17	79.83
EES15405	Sorghum	cytosol	80.83	79.51
Bra031094.1-P	Field mustard	cytosol	78.33	78.99
Os08t0505300-00	Rice	plasma membrane	43.33	78.79
Zm00001d045889_P002	Maize	cytosol, extracellular	80.83	78.23
CDY26343	Canola	cytosol	77.5	78.15
CDX81941	Canola	cytosol	77.5	78.15
Os06t0319700-01	Rice	cytosol, nucleus, plasma membrane, plastid	80.0	77.42
Zm00001d051662_P001	Maize	cytosol	81.67	77.17
TraesCS7A01G244800.1	Wheat	cytosol	78.33	77.05
TraesCS7B01G146600.1	Wheat	cytosol, unclear	78.33	77.05
TraesCS7D01G243500.1	Wheat	cytosol	78.33	77.05
Bra038580.1-P	Field mustard	cytosol	42.5	70.83
VIT_11s0016g02650.t01	Wine grape	cytosol	87.5	69.08
TraesCS6B01G310100.1	Wheat	cytosol, unclear	65.0	63.41
TraesCS6D01G262100.1	Wheat	cytosol	65.0	63.41
Zm00001d017850_P001	Maize	cytosol, extracellular, mitochondrion	64.17	62.6
Bra039016.1-P	Field mustard	nucleus	46.67	47.86
KRH63209	Soybean	cytosol	40.0	42.11

Protein Annotations

EntrezGene:100305583	EntrezGene:100810835	MapMan:17.1.2.1.32	Gene3D:3.10.440.10	EMBL:ACUP02000007	EMBL:ACUP02004330
EMBL:BT089255	UniProt:C6SVR2	EnsemblPlantsGene:GLYMA_01G004300	GO:GO:0002181	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	GO:GO:0022625	InterPro:IPR023621	ProteinID:KRH49031.1	EnsemblPlants:KRH74177	ProteinID:KRH74177
ProteinID:KRH74177.1	ProteinID:KRH74178.1	PFAM:PD006030	PFAM:PF01198	ScanProsite:PS01144	PANTHER:PTHR10956
InterPro:Ribosomal_L31e	InterPro:Ribosomal_L31e_CS	InterPro:Ribosomal_L31e_dom_sf	SMART:SM01380	SUPFAM:SSF54575	UniParc:UPI0001B15831
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:429326..430538

Molecular Weight (calculated)

13948.0 Da

IEP (calculated)

10.544

GRAVY (calculated)

-0.787

Length

120 amino acids

Sequence
(BLAST)

001: MVEKAKGRKE EVVTREYTIN LHKRLHGCTF KKKAPKAIKE IRKFAQKAMG TNDVRVDVKL NKFVWSQGIR SVPRRIRVRI ARKRNDDEDA KEELYSLVTV
101: VEIPKDELKG LGTKVIDDED

Best Arabidopsis Sequence Match ( AT2G19740.1 )
(BLAST)

001: MEKGKGRKEE VVTREYTINL HRRLHSCTFK KKAPNAIKEI RKFALKAMGT KDVRVDVKLN KQIWSKGIRG PPRRIRVRVA RKRNDDEDAK EEFFSLVTVA
101: EIPAEGLSGL GTKVIEEEE

Arabidopsis Description

RPL31A60S ribosomal protein L31-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.