Factsheet for Bra038580.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0505300-00	Rice	plasma membrane	68.06	74.24
KRH66370	Soybean	cytosol	59.72	59.72
Bra036709.1-P	Field mustard	cytosol	94.44	57.14
CDY26343	Canola	cytosol	94.44	57.14
Bra031094.1-P	Field mustard	cytosol	93.06	56.3
Bra039016.1-P	Field mustard	nucleus	87.5	53.85
Bra026455.1-P	Field mustard	cytosol	88.89	53.78
Bra035629.1-P	Field mustard	cytosol	88.89	53.78
Bra002798.1-P	Field mustard	cytosol	88.89	53.78
Bra010436.1-P	Field mustard	cytosol	84.72	52.14
Bra006860.1-P	Field mustard	cytosol	81.94	49.58
PGSC0003DMT400000921	Potato	cytosol	79.17	47.5
Solyc12g008720.1.1	Tomato	nucleus	79.17	47.5
Solyc05g008010.2.1	Tomato	cytosol, nucleus, unclear	76.39	45.83
PGSC0003DMT400078454	Potato	cytosol	75.0	45.0
HORVU5Hr1G052980.2	Barley	cytosol	75.0	44.63
GSMUA_Achr6P03460_001	Banana	cytosol	75.0	44.63
EES15405	Sorghum	cytosol	75.0	44.26
GSMUA_Achr3P03830_001	Banana	cytosol	73.61	43.8
GSMUA_Achr9P12560_001	Banana	cytosol	72.22	43.33
TraesCS7B01G146600.1	Wheat	cytosol, unclear	72.22	42.62
TraesCS7A01G244800.1	Wheat	cytosol	72.22	42.62
TraesCS7D01G243500.1	Wheat	cytosol	72.22	42.62
KRH60160	Soybean	cytosol	70.83	42.5
KRH74177	Soybean	cytosol	70.83	42.5
KRH49031	Soybean	endoplasmic reticulum	70.83	42.5
KRH41451	Soybean	cytosol, endoplasmic reticulum	70.83	42.5
EES05621	Sorghum	cytosol	72.22	42.28
Zm00001d045889_P002	Maize	cytosol, extracellular	72.22	41.94
TraesCS6B01G310100.1	Wheat	cytosol, unclear	70.83	41.46
TraesCS6D01G262100.1	Wheat	cytosol	70.83	41.46
Zm00001d017850_P001	Maize	cytosol, extracellular, mitochondrion	70.83	41.46
Os06t0319700-01	Rice	cytosol, nucleus, plasma membrane, plastid	70.83	41.13
Zm00001d051662_P001	Maize	cytosol	69.44	39.37
VIT_11s0016g02650.t01	Wine grape	cytosol	77.78	36.84
KRH63209	Soybean	cytosol	18.06	11.4

Protein Annotations

Gene3D:3.10.440.10	MapMan:35.1	EnsemblPlantsGene:Bra038580	EnsemblPlants:Bra038580.1	EnsemblPlants:Bra038580.1-P	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR023621	UniProt:M4FBW4	PFAM:PF01198	ScanProsite:PS01144	PANTHER:PTHR10956
PANTHER:PTHR10956:SF22	InterPro:Ribosomal_L31e	InterPro:Ribosomal_L31e_CS	InterPro:Ribosomal_L31e_dom_sf	SMART:SM01380	SUPFAM:SSF54575
UniParc:UPI000253E54A	:	:	:	:	:

Description

AT2G19740 (E=5e-032) | 60S ribosomal protein L31 (RPL31A)

Coordinates

chrScaffold000149:-:228502..228720

Molecular Weight (calculated)

8124.6 Da

IEP (calculated)

5.873

GRAVY (calculated)

-0.646

Length

72 amino acids

Sequence
(BLAST)

1: MGTKDVRVDV KLNKQIWSRG IHGPPRRVRV CVARKRNDDE DAKEEFYSLV TVAEIPAEGL SSLGTKVIDE DE

Best Arabidopsis Sequence Match ( AT2G19740.1 )
(BLAST)

001: MEKGKGRKEE VVTREYTINL HRRLHSCTFK KKAPNAIKEI RKFALKAMGT KDVRVDVKLN KQIWSKGIRG PPRRIRVRVA RKRNDDEDAK EEFFSLVTVA
101: EIPAEGLSGL GTKVIEEEE

Arabidopsis Description

RPL31A60S ribosomal protein L31-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.