Factsheet for Bra010436.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14309	Canola	cytosol	94.02	100.0
Bra002798.1-P	Field mustard	cytosol	96.58	94.96
Bra026455.1-P	Field mustard	cytosol	96.58	94.96
Bra035629.1-P	Field mustard	cytosol	96.58	94.96
AT4G26230.1	Thale cress	cytosol	93.16	91.6
Bra006860.1-P	Field mustard	cytosol	91.45	89.92
Bra036709.1-P	Field mustard	cytosol	88.89	87.39
Bra031094.1-P	Field mustard	cytosol	88.03	86.55
Bra038580.1-P	Field mustard	cytosol	52.14	84.72
Solyc12g008720.1.1	Tomato	nucleus	83.76	81.67
PGSC0003DMT400078454	Potato	cytosol	83.76	81.67
PGSC0003DMT400000921	Potato	cytosol	83.76	81.67
Solyc05g008010.2.1	Tomato	cytosol, nucleus, unclear	82.91	80.83
KRH60160	Soybean	cytosol	81.2	79.17
KRH74177	Soybean	cytosol	81.2	79.17
KRH49031	Soybean	endoplasmic reticulum	81.2	79.17
HORVU5Hr1G052980.2	Barley	cytosol	81.2	78.51
GSMUA_Achr6P03460_001	Banana	cytosol	81.2	78.51
KRH41451	Soybean	cytosol, endoplasmic reticulum	80.34	78.33
GSMUA_Achr3P03830_001	Banana	cytosol	80.34	77.69
GSMUA_Achr9P12560_001	Banana	cytosol	78.63	76.67
EES15405	Sorghum	cytosol	77.78	74.59
Os08t0505300-00	Rice	plasma membrane	41.88	74.24
EES05621	Sorghum	cytosol	76.07	72.36
TraesCS7A01G244800.1	Wheat	cytosol	73.5	70.49
TraesCS7B01G146600.1	Wheat	cytosol, unclear	73.5	70.49
TraesCS7D01G243500.1	Wheat	cytosol	73.5	70.49
Zm00001d045889_P002	Maize	cytosol, extracellular	73.5	69.35
Os06t0319700-01	Rice	cytosol, nucleus, plasma membrane, plastid	72.65	68.55
Zm00001d051662_P001	Maize	cytosol	74.36	68.5
VIT_11s0016g02650.t01	Wine grape	cytosol	84.62	65.13
KRH66370	Soybean	cytosol	38.46	62.5
TraesCS6B01G310100.1	Wheat	cytosol, unclear	58.97	56.1
TraesCS6D01G262100.1	Wheat	cytosol	58.97	56.1
Zm00001d017850_P001	Maize	cytosol, extracellular, mitochondrion	58.97	56.1
Bra039016.1-P	Field mustard	nucleus	53.85	53.85
KRH63209	Soybean	cytosol	34.19	35.09

Protein Annotations

MapMan:17.1.2.1.32	Gene3D:3.10.440.10	EnsemblPlantsGene:Bra010436	EnsemblPlants:Bra010436.1	EnsemblPlants:Bra010436.1-P	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR023621	UniProt:M4D1T6	PFAM:PD006030	PFAM:PF01198	ScanProsite:PS01144
PANTHER:PTHR10956	PANTHER:PTHR10956:SF22	InterPro:Ribosomal_L31e	InterPro:Ribosomal_L31e_CS	InterPro:Ribosomal_L31e_dom_sf	SMART:SM01380
SUPFAM:SSF54575	UniParc:UPI0002545863	SEG:seg	:	:	:

Description

AT5G56710 (E=2e-045) | 60S ribosomal protein L31 (RPL31C)

Coordinates

chrA08:-:14526147..14526777

Molecular Weight (calculated)

13523.4 Da

IEP (calculated)

10.590

GRAVY (calculated)

-0.880

Length

117 amino acids

Sequence
(BLAST)

001: MSDKTKGRKE EVVTREYTIN LHRRLHSCTF KKKAPKAIKE ITKFAEKAMG RKDVRVDVKL NKQIWSRGPP RRIRVRVARK RNDDEDAKEE FFSLVTVAEI
101: PAEGLSGLGT KVIDEED

Best Arabidopsis Sequence Match ( AT5G56710.1 )
(BLAST)

001: MSEKKGRKEE VITREYTINL HRRLHKCTFK KKAPKAIKEI RKFAEKAMGT KDVRVDVKLN KQIWSKGIRG PPRRIRVRVA RKRNDDEDAK EEFFSLVTVA
101: EIPAEGLSGL GTKVIEEED

Arabidopsis Description

RPL31C60S ribosomal protein L31-3 [Source:UniProtKB/Swiss-Prot;Acc:P51420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.