Factsheet for Bra030733.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005361.1-P
Bra006289.1-P
Bra008713.1-P
Bra010436.1-P
Bra010500.1-P
Bra011320.1-P
Bra012620.1-P
Bra012978.1-P
Bra013774.1-P
Bra014333.1-P
Bra014558.1-P
Bra016706.1-P
Bra017331.1-P
Bra018026.1-P
Bra019662.1-P
Bra019760.1-P
Bra020006.1-P
Bra021478.1-P
Bra023003.1-P
Bra023511.1-P
Bra023964.1-P
Bra024481.1-P
Bra024985.1-P
Bra024986.1-P
Bra026455.1-P
Bra026839.1-P
Bra026974.1-P
Bra027986.1-P
Bra029328.1-P
Bra029785.1-P
Bra029928.1-P
Bra032828.1-P
Bra034085.1-P
Bra034692.1-P
Bra034693.1-P
Bra035298.1-P
Bra035427.1-P
Bra037242.1-P
Bra039150.1-P
Bra039911.1-P
Bra040115.1-P
Bra040415.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G08560.1	Bra020006.1-P	AT1G09630.1	19959995
AT1G08560.1	Bra019760.1-P	AT1G12360.1	11157980
AT1G08560.1	Bra026974.1-P	AT1G12360.1	11157980
AT1G08560.1	Bra016706.1-P	AT1G14320.1	24556609
AT1G08560.1	Bra019662.1-P	AT1G14320.1	24556609
AT1G08560.1	Bra026839.1-P	AT1G14320.1	24556609
AT1G08560.1	Bra032828.1-P	AT1G27400.1	24556609
AT1G08560.1	Bra024985.1-P	AT1G43170.1	24556609
AT1G08560.1	Bra024986.1-P	AT1G43170.1	24556609
AT1G08560.1	Bra027986.1-P	AT1G43170.1	24556609
AT1G08560.1	Bra035298.1-P	AT1G43170.1	24556609
AT1G08560.1	Bra035427.1-P	AT1G59750.1	19959995
AT1G08560.1	Bra024481.1-P	AT2G18020.1	24556609
AT1G08560.1	Bra037242.1-P	AT2G18020.1	24556609
AT1G08560.1	Bra039911.1-P	AT2G18020.1	24556609
AT1G08560.1	Bra005361.1-P	AT2G35190.1	23515225
AT1G08560.1	Bra017331.1-P	AT2G35190.1	23515225
AT1G08560.1	Bra023003.1-P	AT2G35190.1	23515225
AT1G08560.1	Bra014558.1-P	AT2G42740.1	24556609
AT1G08560.1	Bra021478.1-P	AT3G02080.1	24556609
AT1G08560.1	Bra039150.1-P	AT3G02080.1	24556609
AT1G08560.1	Bra040115.1-P	AT3G04920.1	24556609
AT1G08560.1	Bra040415.1-P	AT3G04920.1	24556609
AT1G08560.1	Bra014333.1-P	AT3G09740.1	23515225
AT1G08560.1	Bra029785.1-P	AT3G09740.1	23515225
AT1G08560.1	Bra034085.1-P	AT3G09740.1	23515225
AT1G08560.1	Bra034692.1-P	AT3G13300.1	24556609
AT1G08560.1	Bra034693.1-P	AT3G13300.1	24556609
AT1G08560.1	Bra018026.1-P	AT3G48930.1	24556609
AT1G08560.1	Bra029928.1-P	AT3G48930.1	24556609
AT1G08560.1	Bra012620.1-P	AT4G18060.1	24556609
AT1G08560.1	Bra010500.1-P	AT4G24190.1	24556609
AT1G08560.1	Bra013774.1-P	AT4G24190.1	24556609
AT1G08560.1	Bra010436.1-P	AT4G26230.1	24556609
AT1G08560.1	Bra026455.1-P	AT4G26230.1	24556609
AT1G08560.1	Bra011320.1-P	AT4G32070.1	24556609
AT1G08560.1	Bra023964.1-P	AT4G32070.1	24556609
AT1G08560.1	Bra006289.1-P	AT5G15200.1	24556609
AT1G08560.1	Bra008713.1-P	AT5G15200.1	24556609
AT1G08560.1	Bra023511.1-P	AT5G15200.1	24556609
AT1G08560.1	Bra012978.1-P	AT5G61210.1	23515225
AT1G08560.1	Bra029328.1-P	AT5G61210.1	23515225

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31137	Canola	cytosol	97.37	97.37
Bra018615.1-P	Field mustard	cytosol	90.13	89.25
AT1G08560.1	Thale cress	cytosol	83.22	81.61
VIT_04s0008g02770.t01	Wine grape	cytosol	74.01	72.35
PGSC0003DMT400041982	Potato	cytosol	72.7	71.06
Solyc06g053760.2.1	Tomato	cytosol	71.71	70.1
GSMUA_Achr1P25170_001	Banana	cytosol	53.95	66.94
KRH08461	Soybean	cytosol	68.75	64.91
KRH70119	Soybean	cytosol	66.12	63.21
TraesCS4B01G067100.1	Wheat	cytosol	32.89	61.35
KXG37622	Sorghum	cytosol	60.53	58.97
Zm00001d033919_P001	Maize	plasma membrane	59.54	57.83
Zm00001d013323_P001	Maize	cytosol	59.54	57.64
Os03t0736500-01	Rice	cytosol, plasma membrane	58.55	57.23
TraesCS4D01G066100.1	Wheat	cytosol	57.57	55.38
TraesCS4B01G067200.1	Wheat	cytosol	56.58	54.78
TraesCS4A01G247700.1	Wheat	cytosol	56.58	54.43
Bra031761.1-P	Field mustard	cytosol	27.63	50.91
HORVU4Hr1G011180.2	Barley	cytosol	57.57	48.21
Bra031760.1-P	Field mustard	cytosol, nucleus, plasma membrane	16.12	47.12
Bra031759.1-P	Field mustard	cytosol	43.09	43.96
Bra019872.1-P	Field mustard	cytosol	42.43	43.29
Bra016846.1-P	Field mustard	cytosol	42.11	42.95
Bra034202.1-P	Field mustard	cytosol	42.43	42.3
Bra039622.1-P	Field mustard	cytosol	36.84	38.89
Bra024476.1-P	Field mustard	cytosol	36.51	38.81
Bra001422.1-P	Field mustard	cytosol	42.43	38.74
Bra034808.1-P	Field mustard	cytosol, nucleus, plastid	40.79	38.15
Bra009318.1-P	Field mustard	cytosol	36.84	36.96
Bra028672.1-P	Field mustard	cytosol	36.51	36.63
Bra005968.1-P	Field mustard	cytosol	36.51	36.51
Bra033436.1-P	Field mustard	cytosol	39.8	35.38
Bra012806.1-P	Field mustard	cytosol, nucleus, peroxisome	35.2	34.74
Bra036431.1-P	Field mustard	cytosol	29.61	32.37
Bra031972.1-P	Field mustard	cytosol	28.95	31.43
TraesCS6B01G175300.1	Wheat	cytosol	26.64	26.47
OQU78880	Sorghum	cytosol	26.64	26.3
Zm00001d035331_P001	Maize	cytosol	25.66	26.17
TraesCS6A01G147100.1	Wheat	cytosol	26.32	26.14
TraesCS6D01G136400.1	Wheat	cytosol	26.32	26.14
HORVU6Hr1G028850.1	Barley	cytosol	25.99	25.82
Os12t0192300-00	Rice	plasma membrane	26.97	23.56

Protein Annotations

Gene3D:1.20.58.70	MapMan:13.4.2.3.1	MapMan:22.7.1.1	EnsemblPlantsGene:Bra030733	EnsemblPlants:Bra030733.1	EnsemblPlants:Bra030733.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0061025	InterPro:IPR000727
UniProt:M4EPL3	PFAM:PF00804	PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957
PANTHER:PTHR19957:SF91	SMART:SM00397	SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS
InterPro:Syntaxin_N	TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI0002546B7E	SEG:seg	:

Description

AT1G08560 (E=9e-128) SYP111, KN, ATSYP111 | SYP111 (SYNTAXIN OF PLANTS 111); SNAP receptor

Coordinates

chrA08:+:20600845..20601759

Molecular Weight (calculated)

34816.0 Da

IEP (calculated)

6.650

GRAVY (calculated)

-0.508

Length

304 amino acids

Sequence
(BLAST)

001: MNDLMTKSFT SYVDLKKAAM KDLESGPADL EMTNKTDENL SSFLEEAEKV KSEMSLIEAA LSRISRYNDE SKSAHRSESM KSLRNKISNE IVSGLRKAKS
101: IKSNLEEMDR ANREIKRLSG TTPVYRSRVT VTNGLRKKLK EVMMEFQELR QRMMSEYKET VERRYFTVTG ERPDEEMIEK IVTDGGEEFL TRAIQEHGRG
201: KVLETVVEIQ DRYDAAKEIE KSLLELHQVF LDMAVMVEAQ GEQMDEIEHH VVNAGHYVKD GAKELKTAKN HQRSSRKWMC VGVIVLLLII LVVIIPIVTS
301: FTSS

Best Arabidopsis Sequence Match ( AT1G08560.1 )
(BLAST)

001: MNDLMTKSFM SYVDLKKAAM KDMEAGPDFD LEMASTKADK MDENLSSFLE EAEYVKAEMG LISETLARIE QYHEESKGVH KAESVKSLRN KISNEIVSGL
101: RKAKSIKSKL EEMDKANKEI KRLSGTPVYR SRTAVTNGLR KKLKEVMMEF QGLRQKMMSE YKETVERRYF TVTGEHANDE MIEKIITDNA GGEEFLTRAI
201: QEHGKGKVLE TVVEIQDRYD AAKEIEKSLL ELHQVFLDMA VMVESQGEQM DEIEHHVINA SHYVADGANE LKTAKSHQRN SRKWMCIGII VLLLIILIVV
301: IPIITSFSSS

Arabidopsis Description

KNSYP111 [Source:UniProtKB/TrEMBL;Acc:A0A178WAC8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.