Factsheet for Bra029785.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44726	Canola	cytosol	100.0	100.0
Bra034085.1-P	Field mustard	cytosol	93.66	95.8
AT3G09740.1	Thale cress	cytosol	94.03	94.74
Bra014333.1-P	Field mustard	cytosol	33.58	87.38
VIT_08s0040g02130.t01	Wine grape	cytosol	78.36	79.25
Solyc10g084210.1.1	Tomato	nucleus	76.87	77.74
GSMUA_Achr6P22560_001	Banana	cytosol, plastid	75.75	76.03
GSMUA_Achr9P00150_001	Banana	cytosol	75.0	75.56
GSMUA_Achr5P09270_001	Banana	plasma membrane	69.78	71.65
Os05t0553700-01	Rice	plasma membrane	67.91	67.91
EES18638	Sorghum	cytosol	67.91	67.16
Zm00001d038931_P002	Maize	plasma membrane	67.54	67.04
TraesCS1A01G379800.1	Wheat	cytosol	67.16	66.67
TraesCS1B01G401800.1	Wheat	cytosol	67.16	66.67
HORVU1Hr1G084160.1	Barley	cytosol	66.79	66.3
TraesCS1D01G387200.1	Wheat	cytosol	66.79	66.3
Bra038292.1-P	Field mustard	cytosol	62.31	63.26
Bra027876.1-P	Field mustard	cytosol	35.45	62.5
Bra007605.1-P	Field mustard	cytosol, plastid	49.63	52.78
TraesCS1D01G190400.1	Wheat	cytosol	43.66	49.79

Protein Annotations

EnsemblPlants:Bra029785.1	EnsemblPlants:Bra029785.1-P	EnsemblPlantsGene:Bra029785	Gene3D:1.20.5.110	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR000727	InterPro:T_SNARE_dom	ncoils:Coil	PANTHER:PTHR19957	PANTHER:PTHR19957:SF208
PFAM:PF05739	PFscan:PS50192	SMART:SM00397	SUPFAM:SSF58038	TMHMM:TMhelix	UniParc:UPI0002547B2F
UniProt:M4ELW5	MapMan:13.4.2.3.3	MapMan:22.7.4.3	:	:	:

Description

AT3G09740 (E=1e-139) SYP71, ATSYP71 | SYP71 (SYNTAXIN OF PLANTS 71); protein transporter

Coordinates

chrA05:-:22278555..22280195

Molecular Weight (calculated)

30121.8 Da

IEP (calculated)

4.912

GRAVY (calculated)

-0.499

Length

268 amino acids

Sequence
(BLAST)

001: MTVIDILTRV DTICKKYDKY DVDKQRESNI SGDDAFARLY GAFETQIETA LEKAEIVTKE KNRASAVAMN AEIRRTKARL SEEVPKLQRL ALKRVKGLTT
101: EELAARNDLV LALPARIEAI PDGTAGGPKS TSAWAPSTTS RPDIKFDSDG RFDDDYFQES HESSQFRQEF EMRKIKQASG DQGLDMISEG LDALKNMASD
201: MNEELDRQVP LMDEIDSKVD RATSDLKNTN VRLKDTVNQL RSSRNFCIDI VLLCIVLGIA AYLYNVLK

Best Arabidopsis Sequence Match ( AT3G09740.1 )
(BLAST)

001: MTVIDILTRV DSICKKYDKY DVDKQREANI SGDDAFARLY GAFETQIETA LEKAELVTKE KNRAAAVAMN AEIRRTKARL SEEVPKLQRL AVKRVKGLTT
101: EELAARNDLV LALPARIEAI PDGTAGGPKS TSAWTPSSTT SRPDIKFDSD GRFDDDYFQE SNESSQFRQE YEMRKIKQEQ GLDMISEGLD ALKNMASDMN
201: EELDRQVPLM DEIDTKVDRA TSDLKNTNVR LKDTVNQLRS SRNFCIDIVL LCIVLGIAAY LYNVLK

Arabidopsis Description

SYP71At3g09740 [Source:UniProtKB/TrEMBL;Acc:Q2HIU8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.