Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • golgi 1
  • mitochondrion 1
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, golgi, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:golgi, nucleus
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY48918 Canola cytosol, plastid 81.35 75.93
CDX71736 Canola cytosol 75.0 70.79
AT3G61450.2 Thale cress cytosol, plastid 66.67 63.64
Bra014333.1-P Field mustard cytosol 24.6 60.19
Bra034085.1-P Field mustard cytosol 51.98 50.0
Bra029785.1-P Field mustard cytosol 52.78 49.63
Bra038292.1-P Field mustard cytosol 45.24 43.18
VIT_15s0046g01850.t01 Wine grape cytosol 24.21 35.47
Bra027876.1-P Field mustard cytosol 18.25 30.26
Protein Annotations
EnsemblPlants:Bra007605.1EnsemblPlants:Bra007605.1-PEnsemblPlantsGene:Bra007605Gene3D:1.20.5.110InterPro:IPR000727InterPro:T_SNARE_dom
PANTHER:PTHR19957PANTHER:PTHR19957:SF129PFscan:PS50192SMART:SM00397SUPFAM:SSF58038UniParc:UPI00025429BD
UniProt:M4CTR1MapMan:13.4.2.3.3MapMan:22.7.4.3:::
Description
AT3G61450 (E=2e-061) SYP73, ATSYP73 | SYP73 (SYNTAXIN OF PLANTS 73); protein transporter
Coordinates
chrA09:+:29984767..29989426
Molecular Weight (calculated)
27895.8 Da
IEP (calculated)
4.592
GRAVY (calculated)
-0.397
Length
252 amino acids
Sequence
(BLAST)
001: MGVVDLITRV DSICKKYEKY DLVKQREEAN ISGDDAFSRL YSSFESALET LLQKTEEFSS ETNRAKAVAM NAEIRRTKAR LLEGVPKLQR LALKRVKGLS
101: QEEFDARNDM VLSLREKIES VPEGSVPING WTASTSYTNI RLDTNVSGLD FIAEGLDTLK NMAQDINEEL DRQEPLVDEI DTKIDKASTD LKSTNVKLKD
201: TAFRGGDGQV EAVCDACRSE GADASTCTAA SFLDAFVLST SFGLVWFGPR AR
Best Arabidopsis Sequence Match ( AT3G61450.3 )
(BLAST)
001: MGVIDLITRV DSICKKYEKY DINRQRDANV SGDDAFSRLY SAVEYALETV LQKTEDLSSE TNKAKAVAMN AEIRRTKARL LEGIPKLQRL SLKKVKGLSK
101: EELDARNDLV LSLRDKIEAI PESSAPVVGG WEASTSYSNI RFDTNVSDDR IGSEYFQPTG ESDQFKQEYE MKRIKQDQGL DYIAEGLDTL KNMAQDINEE
201: LDRQEPLMDE IDTKIDKAAT DLKSTNVRLK DTVTKVI
Arabidopsis Description
SYP73Syntaxin of plants 73 [Source:UniProtKB/TrEMBL;Acc:F4JEA3]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.