Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39898 | Canola | cytosol | 80.26 | 93.85 |
| Bra034085.1-P | Field mustard | cytosol | 61.84 | 35.88 |
| Bra029785.1-P | Field mustard | cytosol | 62.5 | 35.45 |
| PGSC0003DMT400093449 | Potato | cytosol | 18.42 | 33.33 |
| VIT_08s0040g02130.t01 | Wine grape | cytosol | 47.37 | 27.17 |
| Solyc10g084210.1.1 | Tomato | nucleus | 46.71 | 26.79 |
| KRH19848 | Soybean | cytosol | 46.71 | 26.79 |
| KRH32439 | Soybean | cytosol, plastid | 46.05 | 26.42 |
| GSMUA_Achr6P22560_001 | Banana | cytosol, plastid | 46.05 | 26.22 |
| GSMUA_Achr5P09270_001 | Banana | plasma membrane | 44.74 | 26.05 |
| KRG95962 | Soybean | mitochondrion | 44.74 | 25.66 |
| GSMUA_Achr9P00150_001 | Banana | cytosol | 44.74 | 25.56 |
| KRH67670 | Soybean | endoplasmic reticulum | 44.08 | 25.28 |
| Os05t0553700-01 | Rice | plasma membrane | 42.76 | 24.25 |
| TraesCS1B01G401800.1 | Wheat | cytosol | 40.79 | 22.96 |
| TraesCS1A01G379800.1 | Wheat | cytosol | 40.79 | 22.96 |
| Zm00001d038931_P002 | Maize | plasma membrane | 40.79 | 22.96 |
| HORVU1Hr1G084160.1 | Barley | cytosol | 40.79 | 22.96 |
| EES18638 | Sorghum | cytosol | 40.79 | 22.88 |
| Bra038292.1-P | Field mustard | cytosol | 39.47 | 22.73 |
| TraesCS1D01G387200.1 | Wheat | cytosol | 40.13 | 22.59 |
| Bra007605.1-P | Field mustard | cytosol, plastid | 30.26 | 18.25 |
| TraesCS1D01G190400.1 | Wheat | cytosol | 24.34 | 15.74 |
| Bra014333.1-P | Field mustard | cytosol | 3.95 | 5.83 |
Protein Annotations
Description
AT3G09740 (E=3e-037) SYP71, ATSYP71 | SYP71 (SYNTAXIN OF PLANTS 71); protein transporter
Coordinates
chrA09:-:9501470..9502353
Molecular Weight (calculated)
16412.2 Da
IEP (calculated)
4.953
GRAVY (calculated)
-0.232
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MSALASPYET IDDSVGHHGV SSVFSVRRNP KHDVKGLTTE ELAARNDLVL ALPARIEAIP DGTAGGPKST SAWAPSTMSH GRFDDDYFQE SHESSQFRHE
101: FEMRKIKQAG LDALKNMASD MNELVLFVVY VIDLEPSVYV SAGSGLGSGS VV
101: FEMRKIKQAG LDALKNMASD MNELVLFVVY VIDLEPSVYV SAGSGLGSGS VV
001: MTVIDILTRV DSICKKYDKY DVDKQREANI SGDDAFARLY GAFETQIETA LEKAELVTKE KNRAAAVAMN AEIRRTKARL SEEVPKLQRL AVKRVKGLTT
101: EELAARNDLV LALPARIEAI PDGTAGGPKS TSAWTPSSTT SRPDIKFDSD GRFDDDYFQE SNESSQFRQE YEMRKIKQEQ GLDMISEGLD ALKNMASDMN
201: EELDRQVPLM DEIDTKVDRA TSDLKNTNVR LKDTVNQLRS SRNFCIDIVL LCIVLGIAAY LYNVLK
101: EELAARNDLV LALPARIEAI PDGTAGGPKS TSAWTPSSTT SRPDIKFDSD GRFDDDYFQE SNESSQFRQE YEMRKIKQEQ GLDMISEGLD ALKNMASDMN
201: EELDRQVPLM DEIDTKVDRA TSDLKNTNVR LKDTVNQLRS SRNFCIDIVL LCIVLGIAAY LYNVLK
Arabidopsis Description
SYP71At3g09740 [Source:UniProtKB/TrEMBL;Acc:Q2HIU8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.