Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40392 | Canola | cytosol | 100.0 | 100.0 |
| Bra029785.1-P | Field mustard | cytosol | 87.38 | 33.58 |
| Bra034085.1-P | Field mustard | cytosol | 82.52 | 32.44 |
| AT3G09740.1 | Thale cress | cytosol | 82.52 | 31.95 |
| VIT_08s0040g02130.t01 | Wine grape | cytosol | 69.9 | 27.17 |
| Solyc10g084210.1.1 | Tomato | nucleus | 68.93 | 26.79 |
| GSMUA_Achr9P00150_001 | Banana | cytosol | 66.99 | 25.94 |
| GSMUA_Achr6P22560_001 | Banana | cytosol, plastid | 66.02 | 25.47 |
| Bra007605.1-P | Field mustard | cytosol, plastid | 60.19 | 24.6 |
| GSMUA_Achr5P09270_001 | Banana | plasma membrane | 62.14 | 24.52 |
| HORVU1Hr1G084160.1 | Barley | cytosol | 59.22 | 22.59 |
| TraesCS1A01G379800.1 | Wheat | cytosol | 59.22 | 22.59 |
| TraesCS1B01G401800.1 | Wheat | cytosol | 59.22 | 22.59 |
| TraesCS1D01G387200.1 | Wheat | cytosol | 59.22 | 22.59 |
| EES18638 | Sorghum | cytosol | 59.22 | 22.51 |
| Os05t0553700-01 | Rice | plasma membrane | 58.25 | 22.39 |
| Zm00001d038931_P002 | Maize | plasma membrane | 58.25 | 22.22 |
| Bra038292.1-P | Field mustard | cytosol | 55.34 | 21.59 |
| TraesCS1D01G190400.1 | Wheat | cytosol | 46.6 | 20.43 |
| Bra027876.1-P | Field mustard | cytosol | 5.83 | 3.95 |
Protein Annotations
Description
AT3G09740 (E=3e-040) SYP71, ATSYP71 | SYP71 (SYNTAXIN OF PLANTS 71); protein transporter
Coordinates
chrA08:-:1555322..1555762
Molecular Weight (calculated)
11723.3 Da
IEP (calculated)
8.193
GRAVY (calculated)
-0.183
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVIDILTRV DTICKKYDVD KQCESNISGD DAFARLYGAF ETQIETALEK AEIVTKEKNR ASAVAMNAEI RRIKARLDEE VPKLQRLALK RVSFLSLLLY
101: LSQ
101: LSQ
001: MTVIDILTRV DSICKKYDKY DVDKQREANI SGDDAFARLY GAFETQIETA LEKAELVTKE KNRAAAVAMN AEIRRTKARL SEEVPKLQRL AVKRVKGLTT
101: EELAARNDLV LALPARIEAI PDGTAGGPKS TSAWTPSSTT SRPDIKFDSD GRFDDDYFQE SNESSQFRQE YEMRKIKQEQ GLDMISEGLD ALKNMASDMN
201: EELDRQVPLM DEIDTKVDRA TSDLKNTNVR LKDTVNQLRS SRNFCIDIVL LCIVLGIAAY LYNVLK
101: EELAARNDLV LALPARIEAI PDGTAGGPKS TSAWTPSSTT SRPDIKFDSD GRFDDDYFQE SNESSQFRQE YEMRKIKQEQ GLDMISEGLD ALKNMASDMN
201: EELDRQVPLM DEIDTKVDRA TSDLKNTNVR LKDTVNQLRS SRNFCIDIVL LCIVLGIAAY LYNVLK
Arabidopsis Description
SYP71At3g09740 [Source:UniProtKB/TrEMBL;Acc:Q2HIU8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.