Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014333.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY44726 | Canola | cytosol | 87.38 | 33.58 |
| CDY41590 | Canola | cytosol | 86.41 | 33.46 |
| CDY41311 | Canola | cytosol | 82.52 | 32.08 |
| AT3G09740.1 | Thale cress | cytosol | 82.52 | 31.95 |
| CDY22202 | Canola | cytosol | 81.55 | 31.7 |
| CDX86012 | Canola | cytosol | 55.34 | 30.32 |
| VIT_08s0040g02130.t01 | Wine grape | cytosol | 69.9 | 27.17 |
| Solyc10g084210.1.1 | Tomato | nucleus | 68.93 | 26.79 |
| GSMUA_Achr9P00150_001 | Banana | cytosol | 66.99 | 25.94 |
| GSMUA_Achr6P22560_001 | Banana | cytosol, plastid | 66.02 | 25.47 |
| GSMUA_Achr5P09270_001 | Banana | plasma membrane | 62.14 | 24.52 |
| CDY48918 | Canola | cytosol, plastid | 60.19 | 22.96 |
| CDX71736 | Canola | cytosol | 59.22 | 22.85 |
| TraesCS1D01G387200.1 | Wheat | cytosol | 59.22 | 22.59 |
| TraesCS1B01G401800.1 | Wheat | cytosol | 59.22 | 22.59 |
| TraesCS1A01G379800.1 | Wheat | cytosol | 59.22 | 22.59 |
| HORVU1Hr1G084160.1 | Barley | cytosol | 59.22 | 22.59 |
| EES18638 | Sorghum | cytosol | 59.22 | 22.51 |
| Os05t0553700-01 | Rice | plasma membrane | 58.25 | 22.39 |
| Zm00001d038931_P002 | Maize | plasma membrane | 58.25 | 22.22 |
| TraesCS1D01G190400.1 | Wheat | cytosol | 46.6 | 20.43 |
| CDY53837 | Canola | cytosol | 54.37 | 19.31 |
| CDY50077 | Canola | cytosol | 9.71 | 5.18 |
| CDX86009 | Canola | plastid | 6.8 | 4.38 |
| CDY39898 | Canola | cytosol | 4.85 | 3.85 |
| CDX86011 | Canola | cytosol | 1.94 | 2.53 |
Protein Annotations
| EnsemblPlants:CDY40392 | EnsemblPlantsGene:GSBRNA2T00069591001 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF129 | ProteinID:CDY40392 | ProteinID:CDY40392.1 |
| UniParc:UPI0002545BD5 | UniProt:A0A078HRC4 | MapMan:13.4.2.3.3 | MapMan:22.7.4.3 | : | : |
Description
BnaA02g27060DBnaA02g27060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRC4]
Coordinates
chrLK032469:+:202022..202461
Molecular Weight (calculated)
11723.3 Da
IEP (calculated)
8.193
GRAVY (calculated)
-0.183
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVIDILTRV DTICKKYDVD KQCESNISGD DAFARLYGAF ETQIETALEK AEIVTKEKNR ASAVAMNAEI RRIKARLDEE VPKLQRLALK RVSFLSLLLY
101: LSQ
101: LSQ
001: MTVIDILTRV DSICKKYDKY DVDKQREANI SGDDAFARLY GAFETQIETA LEKAELVTKE KNRAAAVAMN AEIRRTKARL SEEVPKLQRL AVKRVKGLTT
101: EELAARNDLV LALPARIEAI PDGTAGGPKS TSAWTPSSTT SRPDIKFDSD GRFDDDYFQE SNESSQFRQE YEMRKIKQEQ GLDMISEGLD ALKNMASDMN
201: EELDRQVPLM DEIDTKVDRA TSDLKNTNVR LKDTVNQLRS SRNFCIDIVL LCIVLGIAAY LYNVLK
101: EELAARNDLV LALPARIEAI PDGTAGGPKS TSAWTPSSTT SRPDIKFDSD GRFDDDYFQE SNESSQFRQE YEMRKIKQEQ GLDMISEGLD ALKNMASDMN
201: EELDRQVPLM DEIDTKVDRA TSDLKNTNVR LKDTVNQLRS SRNFCIDIVL LCIVLGIAAY LYNVLK
Arabidopsis Description
SYP71At3g09740 [Source:UniProtKB/TrEMBL;Acc:Q2HIU8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.