Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038292.1-P | Field mustard | cytosol | 93.62 | 66.67 |
| CDY53837 | Canola | cytosol | 94.15 | 61.03 |
| AT3G45280.3 | Thale cress | cytosol | 80.85 | 56.93 |
| CDY40392 | Canola | cytosol | 30.32 | 55.34 |
| VIT_06s0004g03090.t01 | Wine grape | cytosol | 64.36 | 45.83 |
| KRH26397 | Soybean | cytosol | 57.98 | 41.13 |
| CDY22202 | Canola | cytosol | 57.45 | 40.75 |
| CDY41311 | Canola | cytosol | 57.45 | 40.75 |
| KRH22921 | Soybean | cytosol | 57.45 | 40.75 |
| Os09t0359700-00 | Rice | cytosol | 46.81 | 40.55 |
| CDY41590 | Canola | cytosol | 56.38 | 39.85 |
| CDY44726 | Canola | cytosol | 55.32 | 38.81 |
| PGSC0003DMT400020948 | Potato | cytosol, plastid | 54.26 | 38.78 |
| Solyc11g069230.1.1 | Tomato | cytosol | 53.19 | 38.02 |
| TraesCS5B01G187300.1 | Wheat | cytosol, plastid | 49.47 | 35.63 |
| KXG35475 | Sorghum | cytosol, plastid | 50.0 | 35.61 |
| TraesCS5D01G194900.1 | Wheat | cytosol | 48.94 | 35.52 |
| CDX71736 | Canola | cytosol | 50.0 | 35.21 |
| CDY48918 | Canola | cytosol, plastid | 49.47 | 34.44 |
| HORVU5Hr1G056780.4 | Barley | cytosol | 49.47 | 32.4 |
| CDY39898 | Canola | cytosol | 22.34 | 32.31 |
| Zm00001d020187_P001 | Maize | cytosol, plastid | 39.89 | 30.86 |
| CDY50077 | Canola | cytosol | 28.72 | 27.98 |
| CDX86009 | Canola | plastid | 21.81 | 25.62 |
| CDX86011 | Canola | cytosol | 2.13 | 5.06 |
Protein Annotations
| EnsemblPlants:CDX86012 | EnsemblPlantsGene:GSBRNA2T00143937001 | ncoils:Coil | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF208 | ProteinID:CDX86012 |
| ProteinID:CDX86012.1 | SEG:seg | UniParc:UPI0004EEBEE8 | MapMan:13.4.2.3.3 | MapMan:22.7.4.3 | : |
Description
BnaC03g55270D
Coordinates
chrLK031844:-:171696..173403
Molecular Weight (calculated)
21574.4 Da
IEP (calculated)
5.218
GRAVY (calculated)
-0.632
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVINIIFRV EEICKKYDKY DVDKQRELGA SGDDAFSRLF NSIDTDIESV VHKAELASTE TNRAAAVALN AEVRRTKARL AEDVVKLQKL AVKKVKGLTK
101: EERESRCDLV IALADRIQVI PDGHERQANN EWGGASAPNK NIKFDISEED MDDGFFQQTE ESSQFRQEYE MRRKKQASKY IDLTFFLF
101: EERESRCDLV IALADRIQVI PDGHERQANN EWGGASAPNK NIKFDISEED MDDGFFQQTE ESSQFRQEYE MRRKKQASKY IDLTFFLF
001: MPVIDIIFRV DEICKKYDKY DIDKHREIGA SGDDAFSRLF TSIDSDIEAV LRKAELASTE KNRAAAVAMN AEVRRTKARL AEDVVKLQKL AVKKIKGLTR
101: EERESRCDLV IALADRLQAI PDGNEHGAKQ ANSDWGGASA PNKNIKFDMS EEDMDDGFFQ QSEESSQFRQ EYEMRRKKQD EGLDIISEGL DALKNLARDM
201: NEELDKQVPL MEEMETKVDG ATSDLKNTNV RLKKQLVQVK L
101: EERESRCDLV IALADRLQAI PDGNEHGAKQ ANSDWGGASA PNKNIKFDMS EEDMDDGFFQ QSEESSQFRQ EYEMRRKKQD EGLDIISEGL DALKNLARDM
201: NEELDKQVPL MEEMETKVDG ATSDLKNTNV RLKKQLVQVK L
Arabidopsis Description
SYP72SYP72 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.