Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- nucleus 2
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32439 | Soybean | cytosol, plastid | 61.9 | 19.62 |
| KRH19848 | Soybean | cytosol | 61.9 | 19.62 |
| PGSC0003DMT400027162 | Potato | cytosol | 60.71 | 19.25 |
| Bra027876.1-P | Field mustard | cytosol | 33.33 | 18.42 |
| KRG95962 | Soybean | mitochondrion | 57.14 | 18.11 |
| KRH67670 | Soybean | endoplasmic reticulum | 55.95 | 17.74 |
| CDY39898 | Canola | cytosol | 27.38 | 17.69 |
| GSMUA_Achr6P22560_001 | Banana | cytosol, plastid | 54.76 | 17.23 |
| GSMUA_Achr9P00150_001 | Banana | cytosol | 53.57 | 16.92 |
| AT3G09740.1 | Thale cress | cytosol | 52.38 | 16.54 |
| GSMUA_Achr5P09270_001 | Banana | plasma membrane | 48.81 | 15.71 |
| CDX86009 | Canola | plastid | 29.76 | 15.62 |
| CDY50077 | Canola | cytosol | 35.71 | 15.54 |
| HORVU1Hr1G084160.1 | Barley | cytosol | 48.81 | 15.19 |
| TraesCS1A01G379800.1 | Wheat | cytosol | 48.81 | 15.19 |
| TraesCS1B01G401800.1 | Wheat | cytosol | 48.81 | 15.19 |
| Os05t0553700-01 | Rice | plasma membrane | 47.62 | 14.93 |
| Zm00001d038931_P002 | Maize | plasma membrane | 47.62 | 14.81 |
| TraesCS1D01G387200.1 | Wheat | cytosol | 47.62 | 14.81 |
| EES18638 | Sorghum | cytosol | 47.62 | 14.76 |
| PGSC0003DMT400020948 | Potato | cytosol, plastid | 45.24 | 14.45 |
| TraesCS1D01G190400.1 | Wheat | cytosol | 21.43 | 7.66 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400093449 | EnsemblPlantsGene:PGSC0003DMG400043020 | ncoils:Coil | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF129 | PGSC:PGSC0003DMG400043020 |
| UniParc:UPI000294BC82 | UniProt:M1DRZ6 | MapMan:35.2 | : | : | : |
Description
Syntaxin [Source:PGSC_GENE;Acc:PGSC0003DMG400043020]
Coordinates
chr1:-:15281943..15282875
Molecular Weight (calculated)
8936.8 Da
IEP (calculated)
10.113
GRAVY (calculated)
-0.113
Length
84 amino acids
Sequence
(BLAST)
(BLAST)
1: VKGLSSKEFV VCNDLVLALP NRITAISDGA AATPKQSGGW GGSGSRAEIK FDLGYKVAFV PKIDKATSDL KNTNVRLKDM INQI
001: MTVIDILTRV DSICKKYDKY DVDKQREANI SGDDAFARLY GAFETQIETA LEKAELVTKE KNRAAAVAMN AEIRRTKARL SEEVPKLQRL AVKRVKGLTT
101: EELAARNDLV LALPARIEAI PDGTAGGPKS TSAWTPSSTT SRPDIKFDSD GRFDDDYFQE SNESSQFRQE YEMRKIKQEQ GLDMISEGLD ALKNMASDMN
201: EELDRQVPLM DEIDTKVDRA TSDLKNTNVR LKDTVNQLRS SRNFCIDIVL LCIVLGIAAY LYNVLK
101: EELAARNDLV LALPARIEAI PDGTAGGPKS TSAWTPSSTT SRPDIKFDSD GRFDDDYFQE SNESSQFRQE YEMRKIKQEQ GLDMISEGLD ALKNMASDMN
201: EELDRQVPLM DEIDTKVDRA TSDLKNTNVR LKDTVNQLRS SRNFCIDIVL LCIVLGIAAY LYNVLK
Arabidopsis Description
SYP71At3g09740 [Source:UniProtKB/TrEMBL;Acc:Q2HIU8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.