Factsheet for VIT_15s0046g01850.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0040g02130.t01	Wine grape	cytosol	53.49	34.72
VIT_06s0004g03090.t01	Wine grape	cytosol	51.16	33.33
AT3G61450.2	Thale cress	cytosol, plastid	44.77	29.17
Bra007605.1-P	Field mustard	cytosol, plastid	35.47	24.21
CDX86011	Canola	cytosol	0.58	1.27

Protein Annotations

EntrezGene:100853404	wikigene:100853404	MapMan:13.4.2.3.3	MapMan:22.7.4.3	ProteinID:CBI40436	ProteinID:CBI40436.3
UniProt:D7UCH1	EMBL:FN596755	GO:GO:0000149	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006886	GO:GO:0006906	GO:GO:0008150	GO:GO:0009987	GO:GO:0012505	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0031201	GO:GO:0048278	EntrezGene:LOC100853404	wikigene:LOC100853404
PANTHER:PTHR19957	PANTHER:PTHR19957:SF129	UniParc:UPI0001BE555C	ArrayExpress:VIT_15s0046g01850	EnsemblPlantsGene:VIT_15s0046g01850	EnsemblPlants:VIT_15s0046g01850.t01
RefSeq:XP_003633981	RefSeq:XP_003633981.1	RefSeq:XP_010661840.1	:	:	:

Description

No Description!

Coordinates

chr15:+:18677470..18681244

Molecular Weight (calculated)

19387.7 Da

IEP (calculated)

4.514

GRAVY (calculated)

-0.612

Length

172 amino acids

Sequence
(BLAST)

001: MSVIDLIERV DAICRRYEKY DLDNHNEALG SQYDVVEAGI EASLQKLEAA TTEEDRAFDV AMKADVQQTK AYLLEEVSEL QKLTLERVNV LSKEEFVAQN
101: DLISMLKERI EAISDGIARG AKQTGGWATS ASHEGIKIGS TSDKRFGSNY CQQTEESIRF RQGNEMQKMK QD

Best Arabidopsis Sequence Match ( AT3G09740.1 )
(BLAST)

001: MTVIDILTRV DSICKKYDKY DVDKQREANI SGDDAFARLY GAFETQIETA LEKAELVTKE KNRAAAVAMN AEIRRTKARL SEEVPKLQRL AVKRVKGLTT
101: EELAARNDLV LALPARIEAI PDGTAGGPKS TSAWTPSSTT SRPDIKFDSD GRFDDDYFQE SNESSQFRQE YEMRKIKQEQ GLDMISEGLD ALKNMASDMN
201: EELDRQVPLM DEIDTKVDRA TSDLKNTNVR LKDTVNQLRS SRNFCIDIVL LCIVLGIAAY LYNVLK

Arabidopsis Description

SYP71At3g09740 [Source:UniProtKB/TrEMBL;Acc:Q2HIU8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.