Factsheet for Bra033436.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000090.1-P
Bra001009.1-P
Bra001422.1-P
Bra001663.1-P
Bra001716.1-P
Bra005361.1-P
Bra005749.1-P
Bra006289.1-P
Bra008713.1-P
Bra009560.1-P
Bra010436.1-P
Bra010455.1-P
Bra010982.1-P
Bra011119.1-P
Bra011260.1-P
Bra012490.1-P
Bra012620.1-P
Bra013905.1-P
Bra014333.1-P
Bra015345.1-P
Bra017103.1-P
Bra017331.1-P
Bra019148.1-P
Bra021248.1-P
Bra021478.1-P
Bra022216.1-P
Bra022345.1-P
Bra023003.1-P
Bra023227.1-P
Bra023511.1-P
Bra024012.1-P
Bra024215.1-P
Bra024481.1-P
Bra024770.1-P
Bra026272.1-P
Bra026455.1-P
Bra029785.1-P
Bra030588.1-P
Bra030816.1-P
Bra031096.1-P
Bra032493.1-P
Bra032828.1-P
Bra033171.1-P
Bra034085.1-P
Bra034808.1-P
Bra035518.1-P
Bra037242.1-P
Bra037569.1-P
Bra037917.1-P
Bra038695.1-P
Bra039130.1-P
Bra039150.1-P
Bra039911.1-P
Bra040115.1-P
Bra040415.1-P
Bra040785.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52400.1	Bra015345.1-P	AT1G04750.1	24556609
AT3G52400.1	Bra030588.1-P	AT1G04750.1	24556609
AT3G52400.1	Bra032493.1-P	AT1G04750.1	24556609
AT3G52400.1	Bra010982.1-P	AT1G25260.1	24556609
AT3G52400.1	Bra012490.1-P	AT1G25260.1	24556609
AT3G52400.1	Bra024770.1-P	AT1G25260.1	24556609
AT3G52400.1	Bra032828.1-P	AT1G27400.1	24556609
AT3G52400.1	Bra023227.1-P	AT1G31970.1	24556609
AT3G52400.1	Bra035518.1-P	AT1G31970.1	24556609
AT3G52400.1	Bra030816.1-P	AT1G56110.1	24556609
AT3G52400.1	Bra040785.1-P	AT1G56110.1	24556609
AT3G52400.1	Bra024481.1-P	AT2G18020.1	24556609
AT3G52400.1	Bra037242.1-P	AT2G18020.1	24556609
AT3G52400.1	Bra039911.1-P	AT2G18020.1	24556609
AT3G52400.1	Bra031096.1-P	AT2G19750.1	24556609
AT3G52400.1	Bra005361.1-P	AT2G35190.1	24556609
AT3G52400.1	Bra017331.1-P	AT2G35190.1	24556609
AT3G52400.1	Bra023003.1-P	AT2G35190.1	24556609
AT3G52400.1	Bra000090.1-P	AT2G38750.1	24556609
AT3G52400.1	Bra017103.1-P	AT2G38750.1	24556609
AT3G52400.1	Bra001009.1-P	AT3G01290.1	24556609
AT3G52400.1	Bra039130.1-P	AT3G01290.1	24556609
AT3G52400.1	Bra021478.1-P	AT3G02080.1	24556609
AT3G52400.1	Bra039150.1-P	AT3G02080.1	24556609
AT3G52400.1	Bra040115.1-P	AT3G04920.1	24556609
AT3G52400.1	Bra040415.1-P	AT3G04920.1	24556609
AT3G52400.1	Bra014333.1-P	AT3G09740.1	24556609
AT3G52400.1	Bra029785.1-P	AT3G09740.1	24556609
AT3G52400.1	Bra034085.1-P	AT3G09740.1	24556609
AT3G52400.1	Bra001422.1-P	AT3G11820.1	24556609
AT3G52400.1	Bra034808.1-P	AT3G11820.1	24556609
AT3G52400.1	Bra038695.1-P	AT3G12030.1	24556609
AT3G52400.1	Bra001663.1-P	AT3G17440.1	24556609
AT3G52400.1	Bra021248.1-P	AT3G17440.1	24556609
AT3G52400.1	Bra022216.1-P	AT3G17440.1	24556609
AT3G52400.1	Bra001716.1-P	AT3G18690.1	24556609
AT3G52400.1	Bra022345.1-P	AT3G18690.1	24556609
AT3G52400.1	Bra037569.1-P	AT3G18690.1	24556609
AT3G52400.1	Bra033171.1-P	AT4G10450.1	24556609
AT3G52400.1	Bra037917.1-P	AT4G10450.1	24556609
AT3G52400.1	Bra012620.1-P	AT4G18060.1	24556609
AT3G52400.1	Bra010436.1-P	AT4G26230.1	24556609
AT3G52400.1	Bra026455.1-P	AT4G26230.1	24556609
AT3G52400.1	Bra024215.1-P	AT4G28250.1	24556609
AT3G52400.1	Bra026272.1-P	AT4G28250.1	24556609
AT3G52400.1	Bra011119.1-P	AT4G29520.1	24556609
AT3G52400.1	Bra011260.1-P	AT4G31340.1	24556609
AT3G52400.1	Bra024012.1-P	AT4G31340.1	24556609
AT3G52400.1	Bra005749.1-P	AT5G02870.1	24556609
AT3G52400.1	Bra009560.1-P	AT5G02870.1	24556609
AT3G52400.1	Bra006289.1-P	AT5G15200.1	24556609
AT3G52400.1	Bra008713.1-P	AT5G15200.1	24556609
AT3G52400.1	Bra023511.1-P	AT5G15200.1	24556609
AT3G52400.1	Bra010455.1-P	AT5G52470.1	24556609
AT3G52400.1	Bra013905.1-P	AT5G52470.1	24556609
AT3G52400.1	Bra019148.1-P	AT5G52470.1	24556609

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23212	Canola	cytosol	100.0	99.71
Bra012806.1-P	Field mustard	cytosol, nucleus, peroxisome	79.24	87.99
AT3G52400.1	Thale cress	cytosol	83.63	83.87
Bra001422.1-P	Field mustard	cytosol	66.67	68.47
KRH32861	Soybean	mitochondrion	64.33	66.27
Bra034808.1-P	Field mustard	cytosol, nucleus, plastid	62.87	66.15
KRH72169	Soybean	cytosol	64.33	65.67
PGSC0003DMT400054965	Potato	cytosol	57.6	65.67
Solyc01g006950.2.1	Tomato	nucleus	57.31	65.33
Solyc10g081850.1.1	Tomato	cytosol	55.26	62.38
VIT_08s0032g01150.t01	Wine grape	cytosol	58.77	62.04
PGSC0003DMT400072325	Potato	cytosol	54.68	61.92
Bra031760.1-P	Field mustard	cytosol, nucleus, plasma membrane	18.13	59.62
GSMUA_Achr6P31140_001	Banana	cytosol	47.66	59.49
Bra031761.1-P	Field mustard	cytosol	28.66	59.39
Bra019872.1-P	Field mustard	cytosol	48.54	55.7
Bra016846.1-P	Field mustard	cytosol	48.25	55.37
Bra031759.1-P	Field mustard	cytosol	48.25	55.37
EER93336	Sorghum	cytosol	47.37	52.77
Zm00001d034365_P001	Maize	plasma membrane	46.78	52.29
GSMUA_Achr8P03020_001	Banana	cytosol	47.08	51.77
Os03t0787000-01	Rice	plasma membrane	49.71	51.52
Bra034202.1-P	Field mustard	cytosol	45.91	51.48
TraesCS5A01G425600.1	Wheat	cytosol, nucleus, plastid	47.66	51.42
TraesCS5B01G427600.1	Wheat	cytosol, golgi, nucleus	47.37	50.62
TraesCSU01G076400.1	Wheat	cytosol, golgi, nucleus	47.37	50.47
Bra009318.1-P	Field mustard	cytosol	42.98	48.51
Bra028672.1-P	Field mustard	cytosol	42.4	47.85
Bra005968.1-P	Field mustard	cytosol	42.4	47.7
HORVU5Hr1G103590.1	Barley	cytosol, mitochondrion	34.8	46.67
Bra031972.1-P	Field mustard	cytosol	38.01	46.43
Bra036431.1-P	Field mustard	cytosol	37.43	46.04
Bra030733.1-P	Field mustard	cytosol	35.38	39.8
Bra018615.1-P	Field mustard	cytosol	35.67	39.74
Zm00001d013114_P001	Maize	cytosol, plastid	32.46	38.01
Zm00001d013115_P001	Maize	cytosol	16.08	37.67
Bra039622.1-P	Field mustard	cytosol	29.82	35.42
Bra024476.1-P	Field mustard	cytosol	29.24	34.97
HORVU5Hr1G103620.1	Barley	cytosol	12.57	27.74

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	MapMan:22.7.1.1	EnsemblPlantsGene:Bra033436	EnsemblPlants:Bra033436.1	EnsemblPlants:Bra033436.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0061025	InterPro:IPR000727
UniProt:M4EXA0	PFAM:PF00804	PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957
PANTHER:PTHR19957:SF69	SMART:SM00397	SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS
InterPro:Syntaxin_N	TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI0002545469	SEG:seg	:

Description

AT3G52400 (E=6e-134) SYP122, ATSYP122 | SYP122 (SYNTAXIN OF PLANTS 122); SNAP receptor

Coordinates

chrA04:+:4194280..4195612

Molecular Weight (calculated)

38491.7 Da

IEP (calculated)

8.780

GRAVY (calculated)

-0.655

Length

342 amino acids

Sequence
(BLAST)

001: MNDLLSRSFN RSVSDDSSPP HSHNIEMSKA KYSSGGSCRG GNNLDKFFLD VEEVNSDLKE LDRLCHSLQL SHEKSKTLHN AKAVKELKDK MDSDVSTALK
101: TAKRVKVNLK ELDRANEVNR SLPESGPGSS SDRQRTSVVN GLRKKLKDAM NNFMRVRETI STEYRDTINR LYFTVTGENP DEDTVDRLIS TGESETFLQK
201: AIQEQGRGRI LDTINEIQER HDAVKDIEKS LNELHQVFLD MAVLVEHQGE QLEDIESHVK RANSLVRSGA DKLVKARFYQ KNTRKWTCYA ILLLIIIVVL
301: VVLFTVKPWE DNGGGGGGST RQAAPVQAQP PPPPALNRRL LR

Best Arabidopsis Sequence Match ( AT3G52400.1 )
(BLAST)

001: MNDLLSGSFK TSVADGSSPP HSHNIEMSKA KVSGGSCHGG NNLDTFFLDV EVVNEDLKEL DRLCHNLRSS NEQSKTLHNA NAVKELKKKM DADVTAALKT
101: ARRLKGNLEA LDRANEVNRS LPESGPGSSS DRQRTSVVNG LRKKLKDEME KFSRVRETIT NEYKETVGRM CFTVTGEYPD EATLERLIST GESETFLQKA
201: IQEQGRGRIL DTINEIQERH DAVKDIEKSL NELHQVFLDM AVLVEHQGAQ LDDIEGNVKR ANSLVRSGAD RLVKARFYQK NTRKWTCFAI LLLLIIVVLI
301: VVFTVKPWES NGGGGGGAPR QATPVQAQPP PPPAVNRRLL R

Arabidopsis Description

SYP122Syntaxin-122 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.