Factsheet for Bra039130.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 2
mitochondrion 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49041	Canola	cytosol	100.0	100.0
CDY37535	Canola	cytosol	100.0	100.0
Bra001009.1-P	Field mustard	cytosol	98.95	98.95
AT3G01290.1	Thale cress	cytosol	95.1	95.44
OQU91678	Sorghum	cytosol	29.72	80.95
Bra029247.1-P	Field mustard	cytosol	79.72	79.44
PGSC0003DMT400017866	Potato	cytosol	80.42	79.31
Bra010119.1-P	Field mustard	cytosol	79.37	79.09
TraesCS1A01G146000.1	Wheat	cytosol, extracellular	80.07	78.16
Bra008363.1-P	Field mustard	cytosol	65.03	78.15
TraesCS1B01G164200.1	Wheat	cytosol, extracellular	79.72	77.82
Bra010118.1-P	Field mustard	cytosol	77.27	77.0
Solyc02g067470.2.1	Tomato	endoplasmic reticulum, nucleus	63.29	76.37
Bra016261.1-P	Field mustard	cytosol	74.83	74.83
Bra007885.1-P	Field mustard	cytosol	74.48	74.74
HORVU1Hr1G038810.3	Barley	golgi	79.72	68.26
TraesCS1D01G144600.2	Wheat	golgi	79.72	68.26
Bra029166.1-P	Field mustard	cytosol	56.64	55.48
Bra029004.1-P	Field mustard	cytosol	19.23	38.46

Protein Annotations

EnsemblPlants:Bra039130.1	EnsemblPlants:Bra039130.1-P	EnsemblPlantsGene:Bra039130	Gene3D:3.30.479.30	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf
ncoils:Coil	PANTHER:PTHR43327	PANTHER:PTHR43327:SF6	PFAM:PF01145	SEG:seg	SMART:SM00244
SUPFAM:SSF117892	UniParc:UPI0002547768	UniProt:M4FDF9	MapMan:35.1	:	:

Description

AT3G01290 (E=2e-141) | band 7 family protein

Coordinates

chrA05:-:23823619..23824695

Molecular Weight (calculated)

31531.1 Da

IEP (calculated)

6.293

GRAVY (calculated)

-0.086

Length

286 amino acids

Sequence
(BLAST)

001: MGNLLCCVLV KQSDVAIKER FGKFQKVLNP GLQFVPWVIG DYVAGHLTLR LQQLDVQCET KTKDNVFVTV VASIQYRVLV DKASDAFYRL SNPTSQIKAY
101: VFDVIRACVP KLNLDDVFEQ KNEIAKSVEE ELDKAMTAYG YEILQTLIID IEPDQQVKRA MNEINAAARM RVAANEKAEA EKIIQIKRAE GEAESKYLSG
201: LGIARQRQAI VDGLRDSVLG FAGNVPGTSA KDVLDMVMMT QYFDTMRDIG ASSKSSSVFI PHGPGAVADV AAQIRNGLLQ AHQTNA

Best Arabidopsis Sequence Match ( AT3G01290.1 )
(BLAST)

001: MGNLFCCVLV KQSDVAVKER FGKFQKVLNP GLQFVPWVIG DYVAGTLTLR LQQLDVQCET KTKDNVFVTV VASIQYRVLA DKASDAFYRL SNPTTQIKAY
101: VFDVIRACVP KLNLDDVFEQ KNEIAKSVEE ELDKAMTAYG YEILQTLIID IEPDQQVKRA MNEINAAARM RVAASEKAEA EKIIQIKRAE GEAESKYLSG
201: LGIARQRQAI VDGLRDSVLG FAGNVPGTSA KDVLDMVMMT QYFDTMRDIG ATSKSSAVFI PHGPGAVSDV AAQIRNGLLQ ANNAS

Arabidopsis Description

HIR3HIR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V7M0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.