Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- mitochondrion 2
- cytosol 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039130.1-P | Field mustard | cytosol | 95.44 | 95.1 |
| CDY37535 | Canola | cytosol | 95.44 | 95.1 |
| CDY49041 | Canola | cytosol | 95.44 | 95.1 |
| Bra001009.1-P | Field mustard | cytosol | 94.74 | 94.41 |
| CDX74295 | Canola | cytosol | 94.74 | 94.41 |
| CDX91951 | Canola | cytosol | 94.74 | 94.41 |
| OQU91678 | Sorghum | cytosol | 29.47 | 80.0 |
| AT5G62740.1 | Thale cress | cytosol | 80.0 | 79.72 |
| PGSC0003DMT400017866 | Potato | cytosol | 80.7 | 79.31 |
| Solyc02g067470.2.1 | Tomato | endoplasmic reticulum, nucleus | 63.86 | 76.79 |
| TraesCS1A01G146000.1 | Wheat | cytosol, extracellular | 77.89 | 75.77 |
| TraesCS1B01G164200.1 | Wheat | cytosol, extracellular | 77.54 | 75.43 |
| AT1G69840.3 | Thale cress | cytosol | 74.04 | 73.78 |
| HORVU1Hr1G038810.3 | Barley | golgi | 78.25 | 66.77 |
| TraesCS1D01G144600.2 | Wheat | golgi | 77.89 | 66.47 |
| AT5G51570.1 | Thale cress | cytosol | 57.19 | 55.82 |
Protein Annotations
| Gene3D:3.30.479.30 | MapMan:35.1 | EntrezGene:821309 | UniProt:A0A178V7M0 | ProteinID:AAF03497.1 | ProteinID:AAF26146.1 |
| ProteinID:AEE73633.1 | ArrayExpress:AT3G01290 | EnsemblPlantsGene:AT3G01290 | RefSeq:AT3G01290 | TAIR:AT3G01290 | RefSeq:AT3G01290-TAIR-G |
| EnsemblPlants:AT3G01290.1 | TAIR:AT3G01290.1 | EMBL:AY084426 | EMBL:BT024707 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf |
| ncoils:Coil | GO:GO:0002239 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0009506 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0016020 | RefSeq:NP_566135.1 | ProteinID:OAP02270.1 | PFAM:PF01145 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR43327 | PANTHER:PTHR43327:SF6 | UniProt:Q9SRH6 | SMART:SM00244 | SUPFAM:SSF117892 |
| UniParc:UPI000005EB0C | SEG:seg | : | : | : | : |
Description
HIR3HIR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V7M0]
Coordinates
chr3:-:87684..89593
Molecular Weight (calculated)
31322.8 Da
IEP (calculated)
5.498
GRAVY (calculated)
-0.069
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNLFCCVLV KQSDVAVKER FGKFQKVLNP GLQFVPWVIG DYVAGTLTLR LQQLDVQCET KTKDNVFVTV VASIQYRVLA DKASDAFYRL SNPTTQIKAY
101: VFDVIRACVP KLNLDDVFEQ KNEIAKSVEE ELDKAMTAYG YEILQTLIID IEPDQQVKRA MNEINAAARM RVAASEKAEA EKIIQIKRAE GEAESKYLSG
201: LGIARQRQAI VDGLRDSVLG FAGNVPGTSA KDVLDMVMMT QYFDTMRDIG ATSKSSAVFI PHGPGAVSDV AAQIRNGLLQ ANNAS
101: VFDVIRACVP KLNLDDVFEQ KNEIAKSVEE ELDKAMTAYG YEILQTLIID IEPDQQVKRA MNEINAAARM RVAASEKAEA EKIIQIKRAE GEAESKYLSG
201: LGIARQRQAI VDGLRDSVLG FAGNVPGTSA KDVLDMVMMT QYFDTMRDIG ATSKSSAVFI PHGPGAVSDV AAQIRNGLLQ ANNAS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.