Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016261.1-P | Field mustard | cytosol | 97.2 | 97.2 |
| CDY11650 | Canola | cytosol | 97.2 | 97.2 |
| CDY38764 | Canola | cytosol | 97.2 | 97.2 |
| Bra007885.1-P | Field mustard | cytosol | 94.41 | 94.74 |
| CDY56083 | Canola | cytosol | 94.41 | 94.74 |
| CDY64507 | Canola | cytosol | 94.06 | 94.39 |
| AT5G62740.1 | Thale cress | cytosol | 85.66 | 85.66 |
| PGSC0003DMT400005236 | Potato | cytosol | 84.97 | 84.97 |
| EER96630 | Sorghum | cytosol | 84.27 | 84.86 |
| KRG99161 | Soybean | cytosol | 84.62 | 84.62 |
| Os08t0398400-01 | Rice | plasma membrane | 83.92 | 84.51 |
| HORVU2Hr1G012690.1 | Barley | cytosol | 70.63 | 84.17 |
| TraesCS4B01G325100.1 | Wheat | golgi | 83.57 | 84.15 |
| TraesCS4D01G322000.1 | Wheat | cytosol | 83.57 | 84.15 |
| TraesCS5A01G497400.1 | Wheat | cytosol | 83.57 | 84.15 |
| KRH69355 | Soybean | cytosol | 83.57 | 83.57 |
| HORVU4Hr1G082240.6 | Barley | cytosol | 83.92 | 83.33 |
| TraesCS5B01G188800.1 | Wheat | cytosol, golgi, unclear | 82.52 | 83.1 |
| TraesCS5D01G195900.1 | Wheat | cytosol | 82.52 | 83.1 |
| TraesCS5A01G193500.1 | Wheat | cytosol | 82.52 | 83.1 |
| Zm00001d005648_P002 | Maize | cytosol, mitochondrion, plasma membrane | 82.17 | 82.75 |
| Os09t0361200-01 | Rice | plasma membrane | 82.87 | 82.58 |
| HORVU5Hr1G056950.4 | Barley | cytosol | 82.17 | 82.46 |
| GSMUA_Achr6P35920_001 | Banana | cytosol | 82.17 | 82.46 |
| Zm00001d050265_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 84.97 | 81.82 |
| KRH74781 | Soybean | cytosol | 79.37 | 79.37 |
| KRH69350 | Soybean | cytosol | 79.37 | 78.55 |
| KRH69356 | Soybean | cytosol | 76.57 | 76.31 |
| PGSC0003DMT400002232 | Potato | cytosol | 70.98 | 74.63 |
| AT3G01290.1 | Thale cress | cytosol | 73.78 | 74.04 |
| KRH45847 | Soybean | cytosol | 18.18 | 72.22 |
| VIT_01s0026g01640.t01 | Wine grape | extracellular | 88.46 | 67.83 |
| Solyc03g058940.2.1 | Tomato | cytosol | 17.83 | 61.45 |
| KXG25127 | Sorghum | mitochondrion | 83.57 | 57.87 |
| AT5G51570.1 | Thale cress | cytosol | 56.99 | 55.82 |
| KRH69353 | Soybean | cytosol | 22.38 | 46.04 |
Protein Annotations
| Gene3D:3.30.479.30 | MapMan:35.1 | EntrezGene:843320 | UniProt:A0A178WD18 | ProteinID:AAG52556.1 | ProteinID:AEE34984.1 |
| ProteinID:AEE34985.1 | ProteinID:AEE34986.1 | ProteinID:AEE34987.1 | ProteinID:AEE34988.1 | ProteinID:AEE34989.1 | ProteinID:AEE34990.1 |
| EMBL:AK317238 | ArrayExpress:AT1G69840 | EnsemblPlantsGene:AT1G69840 | RefSeq:AT1G69840 | TAIR:AT1G69840 | RefSeq:AT1G69840-TAIR-G |
| EnsemblPlants:AT1G69840.3 | TAIR:AT1G69840.3 | EMBL:AY099840 | Unigene:At.28156 | EMBL:BT000336 | InterPro:Band_7 |
| InterPro:Band_7/SPFH_dom_sf | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 |
| GO:GO:0009506 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0016020 | GO:GO:0043424 | RefSeq:NP_001077802.1 |
| RefSeq:NP_001077803.1 | RefSeq:NP_001185358.1 | RefSeq:NP_177142.1 | RefSeq:NP_849870.1 | RefSeq:NP_974116.1 | RefSeq:NP_974117.1 |
| ProteinID:OAP16278.1 | PFAM:PF01145 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR43327 | PANTHER:PTHR43327:SF13 | UniProt:Q9CAR7 | SMART:SM00244 |
| SUPFAM:SSF117892 | UniParc:UPI00000AC3C1 | SEG:seg | : | : | : |
Description
HIR2Hypersensitive-induced response protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR7]
Coordinates
chr1:-:26293595..26295649
Molecular Weight (calculated)
31407.4 Da
IEP (calculated)
5.078
GRAVY (calculated)
-0.217
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQALGCIQV DQSNVAIKET FGKFDEVLEP GCHCLPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.