CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007885.1-P	Field mustard	cytosol	98.95	98.95
CDY56083	Canola	cytosol	98.95	98.95
CDY11650	Canola	cytosol	97.19	96.85
CDY38764	Canola	cytosol	97.19	96.85
AT1G69840.3	Thale cress	cytosol	94.39	94.06
KRH69355	Soybean	cytosol	84.56	84.27
PGSC0003DMT400005236	Potato	cytosol	84.21	83.92
KRG99161	Soybean	cytosol	83.51	83.22
KRH74781	Soybean	cytosol	80.35	80.07
KRH69350	Soybean	cytosol	80.35	79.24
KRH69356	Soybean	cytosol	78.95	78.4
PGSC0003DMT400002232	Potato	cytosol	71.93	75.37
CDY49041	Canola	cytosol	74.74	74.48
CDY37535	Canola	cytosol	74.74	74.48
CDX91951	Canola	cytosol	74.39	74.13
CDX74295	Canola	cytosol	74.39	74.13
KRH45847	Soybean	cytosol	18.25	72.22
VIT_01s0026g01640.t01	Wine grape	extracellular	86.32	65.95
CDY38872	Canola	cytosol	57.19	55.82
CDY32626	Canola	cytosol	56.84	55.48
KRH69353	Soybean	cytosol	22.11	45.32
CDY64099	Canola	cytosol, nucleus	23.16	29.07

Protein Annotations

EnsemblPlants:CDY64507	EnsemblPlantsGene:GSBRNA2T00042303001	Gene3D:3.30.479.30	GO:A0A078JDN4	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf
ncoils:Coil	PANTHER:PTHR43327	PANTHER:PTHR43327:SF13	PFAM:PF01145	ProteinID:CDY64507	ProteinID:CDY64507.1
SEG:seg	SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI0004EF3EF1	UniProt:A0A078JDN4	MapMan:35.1

Description

BnaCnng44030DBnaCnng44030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDN4]

Coordinates

chrLK034477:-:13014..14854

Molecular Weight (calculated)

31089.1 Da

IEP (calculated)

5.211

GRAVY (calculated)

-0.166

Length

285 amino acids

Sequence
(BLAST)

001: MGQVLGCVQV DQSTVAIKET FGKFDDVLQP GCHCLPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA DSAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVES ELEKAMSHYG YEIVQTLIVD IEPDVHVKKA MNEINAASGM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: LGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKDIG ASSKSNAVFI PHGPGAVKDI ASQIRDGLLQ GKAAE

Best Arabidopsis Sequence Match ( AT1G69840.3 )
(BLAST)

001: MGQALGCIQV DQSNVAIKET FGKFDEVLEP GCHCLPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE

Arabidopsis Description

HIR2Hypersensitive-induced response protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.