CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45847	Soybean	cytosol	22.38	88.89
Bra016261.1-P	Field mustard	cytosol	84.97	84.97
CDY11650	Canola	cytosol	84.97	84.97
CDY38764	Canola	cytosol	84.97	84.97
AT1G69840.3	Thale cress	cytosol	84.62	84.62
HORVU2Hr1G012690.1	Barley	cytosol	70.98	84.58
KRH69355	Soybean	cytosol	84.27	84.27
Bra007885.1-P	Field mustard	cytosol	83.92	84.21
CDY56083	Canola	cytosol	83.92	84.21
Os08t0398400-01	Rice	plasma membrane	83.22	83.8
KRH18505	Soybean	endoplasmic reticulum	83.57	83.57
CDY64507	Canola	cytosol	83.22	83.51
EER96630	Sorghum	cytosol	82.17	82.75
TraesCS5A01G497400.1	Wheat	cytosol	81.82	82.39
TraesCS4D01G322000.1	Wheat	cytosol	81.82	82.39
TraesCS4B01G325100.1	Wheat	golgi	81.82	82.39
KRG93497	Soybean	cytosol	82.17	82.17
HORVU4Hr1G082240.6	Barley	cytosol	82.52	81.94
KRH74781	Soybean	cytosol	81.12	81.12
Zm00001d005648_P002	Maize	cytosol, mitochondrion, plasma membrane	80.07	80.63
GSMUA_Achr6P35920_001	Banana	cytosol	79.72	80.0
KRH69350	Soybean	cytosol	80.42	79.58
Zm00001d050265_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	82.52	79.46
Os09t0361200-01	Rice	plasma membrane	79.72	79.44
KRH03423	Soybean	cytosol	78.67	79.23
TraesCS5A01G193500.1	Wheat	cytosol	77.97	78.52
TraesCS5B01G188800.1	Wheat	cytosol, golgi, unclear	77.97	78.52
TraesCS5D01G195900.1	Wheat	cytosol	77.97	78.52
KRH56959	Soybean	cytosol, extracellular	77.62	78.17
HORVU5Hr1G056950.4	Barley	cytosol	77.62	77.89
KRH69356	Soybean	cytosol	76.57	76.31
Solyc03g058940.2.1	Tomato	cytosol	18.88	65.06
VIT_01s0026g01640.t01	Wine grape	extracellular	83.22	63.81
KXG25127	Sorghum	mitochondrion	82.17	56.9
KRH09235	Soybean	cytosol	57.69	56.51
KRH38733	Soybean	endoplasmic reticulum	57.34	56.16
KRH69353	Soybean	cytosol	22.03	45.32

Protein Annotations

EMBL:ACUP02010982	EMBL:BT099392	EnsemblPlants:KRG99161	EnsemblPlantsGene:GLYMA_18G125600	EntrezGene:100805558	Gene3D:3.30.479.30
InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	ncoils:Coil	PANTHER:PTHR43327	PANTHER:PTHR43327:SF13	PFAM:PF01145
ProteinID:KRG99161	ProteinID:KRG99161.1	ProteinID:KRG99162.1	SEG:seg	SMART:SM00244	SUPFAM:SSF117892
UniParc:UPI0001B170C0	UniProt:C6TNR1	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:16421285..16424047

Molecular Weight (calculated)

31782.0 Da

IEP (calculated)

4.892

GRAVY (calculated)

-0.178

Length

286 amino acids

Sequence
(BLAST)

001: MGLALGCLQV EQSTVAIKEV FGKFDDVLEP GFHCVPWFFG TQVAGYLSLR VQQLDVRCET KTKDNVFVTV VASIQYRAMA ERAVDAFYRL SNTREQIQAY
101: VFDVIRACVP KMDLDSSFEQ KKEIARAVEE ELEKAMSAYG YEIVQTLIVD IEPDERVKRA MNEINAAARM REAANEKAEA EKILQIKKAE GDAESKYLSG
201: LGIARQRQAI VDGLRDSVLA FSENVPGTTS KDVMDMVLVT QYFDTLKEIG ASSKSNSIFV PHGPGTVRDI ASQFRDGLLQ GKVAQS

Best Arabidopsis Sequence Match ( AT1G69840.3 )
(BLAST)

001: MGQALGCIQV DQSNVAIKET FGKFDEVLEP GCHCLPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE

Arabidopsis Description

HIR2Hypersensitive-induced response protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.