CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74781	Soybean	cytosol	90.56	90.56
KRH69350	Soybean	cytosol	90.56	89.62
HORVU2Hr1G012690.1	Barley	cytosol	72.73	86.67
KRH69356	Soybean	cytosol	86.71	86.41
Bra016261.1-P	Field mustard	cytosol	85.31	85.31
CDY11650	Canola	cytosol	85.31	85.31
CDY38764	Canola	cytosol	85.31	85.31
Bra007885.1-P	Field mustard	cytosol	84.97	85.26
CDY56083	Canola	cytosol	84.97	85.26
Os08t0398400-01	Rice	plasma membrane	84.62	85.21
CDY64507	Canola	cytosol	84.27	84.56
KRG99161	Soybean	cytosol	84.27	84.27
Os09t0361200-01	Rice	plasma membrane	84.27	83.97
TraesCS4B01G325100.1	Wheat	golgi	83.22	83.8
TraesCS4D01G322000.1	Wheat	cytosol	83.22	83.8
TraesCS5A01G497400.1	Wheat	cytosol	83.22	83.8
EER96630	Sorghum	cytosol	83.22	83.8
AT1G69840.3	Thale cress	cytosol	83.57	83.57
TraesCS5D01G195900.1	Wheat	cytosol	82.87	83.45
TraesCS5B01G188800.1	Wheat	cytosol, golgi, unclear	82.87	83.45
TraesCS5A01G193500.1	Wheat	cytosol	82.87	83.45
HORVU4Hr1G082240.6	Barley	cytosol	83.92	83.33
KRH18505	Soybean	endoplasmic reticulum	83.22	83.22
Zm00001d005648_P002	Maize	cytosol, mitochondrion, plasma membrane	82.52	83.1
HORVU5Hr1G056950.4	Barley	cytosol	82.17	82.46
KRG93497	Soybean	cytosol	82.17	82.17
KRH03423	Soybean	cytosol	80.77	81.34
Zm00001d050265_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	83.22	80.13
KRH56959	Soybean	cytosol, extracellular	79.02	79.58
GSMUA_Achr6P35920_001	Banana	cytosol	77.97	78.25
KRH45847	Soybean	cytosol	18.18	72.22
Solyc03g058940.2.1	Tomato	cytosol	19.93	68.67
VIT_01s0026g01640.t01	Wine grape	extracellular	84.62	64.88
KXG25127	Sorghum	mitochondrion	83.22	57.63
KRH09235	Soybean	cytosol	55.94	54.79
KRH38733	Soybean	endoplasmic reticulum	55.59	54.45
KRH69353	Soybean	cytosol	25.52	52.52

Protein Annotations

EMBL:ACUP02000702	EnsemblPlants:KRH69355	EnsemblPlantsGene:GLYMA_02G021400	EntrezGene:100789295	Gene3D:3.30.479.30	InterPro:Band_7
InterPro:Band_7/SPFH_dom_sf	ncoils:Coil	PANTHER:PTHR43327	PANTHER:PTHR43327:SF6	PFAM:PF01145	ProteinID:KRH69355
ProteinID:KRH69355.1	SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI0002337242	UniProt:I1JBQ0	MapMan:35.1

Description

hypothetical protein

Coordinates

chr2:-:1900379..1903175

Molecular Weight (calculated)

31376.5 Da

IEP (calculated)

5.084

GRAVY (calculated)

-0.166

Length

286 amino acids

Sequence
(BLAST)

001: MGQVLGCVQV DQSSLAIKEV FGKYDDVLEP GCHCVPWCFG SRVAGALSLR VKQLDVRCET KTKDNVFVTV VASIQYRALA EKAVDAYYKL SNTRSQIQSY
101: VFDVIRASVP KMELDATFEQ KNEIAKAVEE ELEKAMSAYG YEIVQTLIVD IEPDEHVKRA MNEINAAARL RVAANEKAEA EKILQIKRAE GDAESKYLAG
201: LGIARQRQAI VDGLRDSVLA FSENVPGTTS KDIMDMVLMT QYFDTMKDIG ASSKSNAVFI PHGPGAVQDV ASQIRNGLLQ GNATQS

Best Arabidopsis Sequence Match ( AT5G62740.1 )
(BLAST)

001: MGNLFCCVQV DQSTVAIKET FGKFEDVLEP GCHFLPWCLG SQVAGYLSLR VQQLDVRCET KTKDNVFVNV VASIQYRALA NKANDAYYKL SNTRGQIQAY
101: VFDVIRASVP KLLLDDVFEQ KNDIAKAVEE ELEKAMSAYG YEIVQTLIVD IEPDEHVKRA MNEINAAARM RLAANEKAEA EKILQIKRAE GEAESKYLSG
201: LGIARQRQAI VDGLRDSVLG FAVNVPGTTA KDVMDMVLVT QYFDTMKEIG ASSKSSAVFI PHGPGAVRDV ASQIRDGLLQ GSSANL

Arabidopsis Description

HIR1HIR4 [Source:UniProtKB/TrEMBL;Acc:A0A178U8N7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.