Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G082240.6 | Barley | cytosol | 100.0 | 83.33 |
| TraesCS5A01G497400.1 | Wheat | cytosol | 97.5 | 82.39 |
| TraesCS4D01G322000.1 | Wheat | cytosol | 97.5 | 82.39 |
| TraesCS4B01G325100.1 | Wheat | golgi | 97.5 | 82.39 |
| Os08t0398400-01 | Rice | plasma membrane | 90.83 | 76.76 |
| Zm00001d050265_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 91.25 | 73.74 |
| KRH69355 | Soybean | cytosol | 86.67 | 72.73 |
| PGSC0003DMT400005236 | Potato | cytosol | 86.25 | 72.38 |
| HORVU5Hr1G056950.4 | Barley | cytosol | 85.42 | 71.93 |
| KRG99161 | Soybean | cytosol | 84.58 | 70.98 |
| GSMUA_Achr6P35920_001 | Banana | cytosol | 84.17 | 70.88 |
| AT1G69840.3 | Thale cress | cytosol | 84.17 | 70.63 |
| KRH74781 | Soybean | cytosol | 83.75 | 70.28 |
| KRH69350 | Soybean | cytosol | 83.33 | 69.2 |
| KRH69356 | Soybean | cytosol | 80.42 | 67.25 |
| Solyc03g058940.2.1 | Tomato | cytosol | 22.92 | 66.27 |
| HORVU5Hr1G062410.6 | Barley | cytosol | 82.08 | 65.02 |
| PGSC0003DMT400002232 | Potato | cytosol | 69.58 | 61.4 |
| HORVU1Hr1G038810.3 | Barley | golgi | 80.0 | 57.48 |
| VIT_01s0026g01640.t01 | Wine grape | extracellular | 87.5 | 56.3 |
| KXG25127 | Sorghum | mitochondrion | 91.67 | 53.27 |
| HORVU7Hr1G017190.1 | Barley | vacuole | 62.08 | 51.74 |
| Bra029004.1-P | Field mustard | cytosol | 25.0 | 41.96 |
| CDY64099 | Canola | cytosol, nucleus | 29.58 | 31.28 |
| KRH45847 | Soybean | cytosol | 7.92 | 26.39 |
| KRH69353 | Soybean | cytosol | 13.33 | 23.02 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G012690.1 | EnsemblPlantsGene:HORVU2Hr1G012690 | Gene3D:3.30.479.30 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf | ncoils:Coil |
| PANTHER:PTHR43327 | PANTHER:PTHR43327:SF6 | PFAM:PF01145 | SMART:SM00244 | SUPFAM:SSF117892 | UniParc:UPI000B46FF31 |
| UniProt:A0A287H3X2 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:26813820..26816904
Molecular Weight (calculated)
26674.8 Da
IEP (calculated)
5.439
GRAVY (calculated)
-0.292
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: LRVQQLDVRC ETKTKDNVFV NVVASVQYRA LADKASDAFY RLSNTREQIQ SYVFDVIRAS VPKMNLDDVF EQKNEIARAV EEELEKAMSA YGYEIVQTLI
101: VDIEPDEHVK RAMNEINAAA RMRLAATEKA EAEKILQIKR AEGEAESKYL AGVGIARQRQ AIVDGLRDSV LAFSENVPGT SSKDVMDMVL VTQYFDTMKD
201: IGASSKSSAV FIPHGPGAVK DIASQIRDGQ LQGRMCACHH
101: VDIEPDEHVK RAMNEINAAA RMRLAATEKA EAEKILQIKR AEGEAESKYL AGVGIARQRQ AIVDGLRDSV LAFSENVPGT SSKDVMDMVL VTQYFDTMKD
201: IGASSKSSAV FIPHGPGAVK DIASQIRDGQ LQGRMCACHH
001: MGQALGCIQV DQSNVAIKET FGKFDEVLEP GCHCLPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE
Arabidopsis Description
HIR2Hypersensitive-induced response protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.