CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 2
cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69350	Soybean	cytosol	95.45	94.46
KRH69355	Soybean	cytosol	90.56	90.56
HORVU2Hr1G012690.1	Barley	cytosol	70.28	83.75
KRH69356	Soybean	cytosol	83.22	82.93
KRG99161	Soybean	cytosol	81.12	81.12
Bra007885.1-P	Field mustard	cytosol	80.77	81.05
CDY56083	Canola	cytosol	80.77	81.05
CDY38764	Canola	cytosol	80.77	80.77
CDY11650	Canola	cytosol	80.77	80.77
Bra016261.1-P	Field mustard	cytosol	80.77	80.77
EER96630	Sorghum	cytosol	80.07	80.63
Os08t0398400-01	Rice	plasma membrane	80.07	80.63
CDY64507	Canola	cytosol	80.07	80.35
TraesCS5A01G193500.1	Wheat	cytosol	79.37	79.93
TraesCS5D01G195900.1	Wheat	cytosol	79.37	79.93
TraesCS5B01G188800.1	Wheat	cytosol, golgi, unclear	79.37	79.93
Os09t0361200-01	Rice	plasma membrane	80.07	79.79
TraesCS4D01G322000.1	Wheat	cytosol	79.02	79.58
TraesCS5A01G497400.1	Wheat	cytosol	79.02	79.58
TraesCS4B01G325100.1	Wheat	golgi	79.02	79.58
AT1G69840.3	Thale cress	cytosol	79.37	79.37
Zm00001d005648_P002	Maize	cytosol, mitochondrion, plasma membrane	78.67	79.23
HORVU4Hr1G082240.6	Barley	cytosol	79.72	79.17
KRH18505	Soybean	endoplasmic reticulum	79.02	79.02
HORVU5Hr1G056950.4	Barley	cytosol	78.67	78.95
KRG93497	Soybean	cytosol	78.67	78.67
KRH03423	Soybean	cytosol	77.62	78.17
KRH56959	Soybean	cytosol, extracellular	76.57	77.11
Zm00001d050265_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	78.67	75.76
GSMUA_Achr6P35920_001	Banana	cytosol	74.48	74.74
KRH45847	Soybean	cytosol	17.13	68.06
Solyc03g058940.2.1	Tomato	cytosol	18.18	62.65
VIT_01s0026g01640.t01	Wine grape	extracellular	80.42	61.66
KXG25127	Sorghum	mitochondrion	78.67	54.48
KRH09235	Soybean	cytosol	55.24	54.11
KRH38733	Soybean	endoplasmic reticulum	54.9	53.77
KRH69353	Soybean	cytosol	22.73	46.76

Protein Annotations

EMBL:ACUP02000070	EnsemblPlants:KRH74781	EnsemblPlantsGene:GLYMA_01G042600	Gene3D:3.30.479.30	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf
ncoils:Coil	PANTHER:PTHR43327	PANTHER:PTHR43327:SF6	PFAM:PF01145	ProteinID:KRH74781	ProteinID:KRH74781.1
SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI00023BB50A	UniProt:I1J5K8	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr1:+:4650283..4652980

Molecular Weight (calculated)

31644.7 Da

IEP (calculated)

5.249

GRAVY (calculated)

-0.230

Length

286 amino acids

Sequence
(BLAST)

001: MFSMFGFVQV EQSSVAIKEV FGKYNDVLDP GCHCVPWYFG NRVAGALSLR IQQLDVRCET KTKDNVFVTV VASIQYRALA EKASDAYYKL SNTRAQIQSY
101: VFDVIRASVP KMELDATFEQ KTDIAKTVEE ELEKAMSAYG YEIVQTLIVD IEPDERVKRA MNEINAAARL RVASNEKAEA EKIVQIKRAE GDAESKYLAG
201: LGVARQRQAI VDGLRDSVLA FSENVPGTTS KDIMDMVLMT QYFDTMKDIG ASSKSNAVFI PHGPGSVHDV ASQIRDGLQQ GNATKS

Best Arabidopsis Sequence Match ( AT1G69840.3 )
(BLAST)

001: MGQALGCIQV DQSNVAIKET FGKFDEVLEP GCHCLPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE

Arabidopsis Description

HIR2Hypersensitive-induced response protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.