Factsheet for TraesCS5A01G193500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G195900.1	Wheat	cytosol	100.0	100.0
TraesCS5B01G188800.1	Wheat	cytosol, golgi, unclear	100.0	100.0
HORVU5Hr1G056950.4	Barley	cytosol	97.89	97.54
EER96630	Sorghum	cytosol	91.2	91.2
Os09t0361200-01	Rice	plasma membrane	91.2	90.24
Zm00001d005648_P002	Maize	cytosol, mitochondrion, plasma membrane	90.14	90.14
TraesCS5A01G497400.1	Wheat	cytosol	85.21	85.21
KRH69355	Soybean	cytosol	83.45	82.87
AT1G69840.3	Thale cress	cytosol	83.1	82.52
PGSC0003DMT400005236	Potato	cytosol	83.1	82.52
GSMUA_Achr6P35920_001	Banana	cytosol	82.39	82.11
TraesCS5A01G212000.1	Wheat	cytosol	80.63	79.79
KRH74781	Soybean	cytosol	79.93	79.37
TraesCS5A01G212100.1	Wheat	cytosol	79.93	79.09
KRH69356	Soybean	cytosol	78.87	78.05
KRG99161	Soybean	cytosol	78.52	77.97
KRH69350	Soybean	cytosol	79.23	77.85
TraesCS1A01G146000.1	Wheat	cytosol, extracellular	78.52	76.11
PGSC0003DMT400002232	Potato	cytosol	69.37	72.43
KRH45847	Soybean	cytosol	16.2	63.89
VIT_01s0026g01640.t01	Wine grape	extracellular	82.04	62.47
TraesCS4A01G372600.1	Wheat	golgi	57.75	56.94
TraesCS7A01G074700.1	Wheat	extracellular	57.75	56.94
KRH69353	Soybean	cytosol	22.18	45.32

Protein Annotations

EnsemblPlants:TraesCS5A01G193500.1	EnsemblPlantsGene:TraesCS5A01G193500	Gene3D:3.30.479.30	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	ncoils:Coil
PANTHER:PTHR43327	PANTHER:PTHR43327:SF13	PFAM:PF01145	SMART:SM00244	SUPFAM:SSF117892	TIGR:cd03407
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:396707067..396708575

Molecular Weight (calculated)

31300.7 Da

IEP (calculated)

5.244

GRAVY (calculated)

-0.095

Length

284 amino acids

Sequence
(BLAST)

001: MGGVLGLVQV DQSTVAIKET FGKFNEVLEP GCHFLPWCIG QRIVGYLSLR VKQLDVRCET KTKDNVFVTV VASVQYRALV DKASDAFYKL SNTKQQIQSY
101: VFDVIRATVP KLELDDAFVQ KDDIAKAVEE ELEKAMSMYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM RSAANDKAEA EKILQIKRAE GEAESKYLAG
201: VGIARQRQAI VDGLRDSVLA FSENVPGTTA KDIMDMVLVT QYFDTMKEIG ASSKSSSVFI PHGPGAVKDV ASQIRDGLLQ ANTL

Best Arabidopsis Sequence Match ( AT1G69840.3 )
(BLAST)

001: MGQALGCIQV DQSNVAIKET FGKFDEVLEP GCHCLPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE

Arabidopsis Description

HIR2Hypersensitive-induced response protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.