Factsheet for TraesCS5A01G212100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G221800.1	Wheat	cytosol	99.3	99.3
TraesCS5B01G211700.1	Wheat	cytosol	99.3	99.3
TraesCS5A01G212000.1	Wheat	cytosol	99.3	99.3
HORVU5Hr1G062410.6	Barley	cytosol	98.61	93.4
Os05t0591900-05	Rice	cytosol	91.29	90.97
KXG22672	Sorghum	cytosol	90.24	90.24
Bra029247.1-P	Field mustard	cytosol	86.76	86.76
Bra010119.1-P	Field mustard	cytosol	86.41	86.41
AT5G62740.1	Thale cress	cytosol	85.71	86.01
PGSC0003DMT400083045	Potato	cytosol	85.02	85.61
Bra010118.1-P	Field mustard	cytosol	84.32	84.32
KRH03423	Soybean	cytosol	82.93	83.8
Bra008363.1-P	Field mustard	cytosol	69.34	83.61
PGSC0003DMT400065192	Potato	cytosol	82.58	83.16
Solyc06g071050.2.1	Tomato	nucleus	83.62	83.05
Solyc03g113220.2.1	Tomato	nucleus	82.23	82.81
KRH56959	Soybean	cytosol, extracellular	81.18	82.04
TraesCS5A01G193500.1	Wheat	cytosol	79.09	79.93
TraesCS5A01G497400.1	Wheat	cytosol	78.75	79.58
TraesCS1A01G146000.1	Wheat	cytosol, extracellular	81.18	79.52
VIT_17s0000g05680.t01	Wine grape	extracellular	86.06	75.77
Zm00001d039173_P002	Maize	plastid	89.9	75.66
GSMUA_Achr6P35910_001	Banana	cytosol	83.62	72.29
TraesCS4A01G372600.1	Wheat	golgi	55.4	55.21
TraesCS7A01G074700.1	Wheat	extracellular	55.4	55.21
VIT_12s0034g00930.t01	Wine grape	mitochondrion	28.22	38.57
VIT_05s0020g03390.t01	Wine grape	extracellular	5.92	11.81

Protein Annotations

EnsemblPlants:TraesCS5A01G212100.1	EnsemblPlantsGene:TraesCS5A01G212100	Gene3D:3.30.479.30	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	ncoils:Coil
PANTHER:PTHR43327	PANTHER:PTHR43327:SF6	PFAM:PF01145	SMART:SM00244	SUPFAM:SSF117892	TIGR:cd03407
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:427321161..427322748

Molecular Weight (calculated)

31491.8 Da

IEP (calculated)

5.438

GRAVY (calculated)

-0.101

Length

287 amino acids

Sequence
(BLAST)

001: MGNLCCCVQV DQSTVAIREQ FGKFDSVLEP GCHCLPWIFG KRVVGHLTLR LQQLDVRCET KTKDNVFVTV VASIQYRPLA GKESDAYYKL TNTRSQIQAY
101: VFDVIRASVP KLNLDDAFVQ KNDIAMAVED ELEKAMSAYG FEIVQTLIVD IEPDAHVKQA MNEINAAARM RVAANEKAEA EKIVQIKRAE GEAEAKYLSG
201: LGIARQRQAI VDGLRDSVLG FSVNVPGTTA KDVMDMVLIT QYFDTMKEVG ASSKSSAVFI PHGPGAVRDI ATQIRDGLLQ GQSASDN

Best Arabidopsis Sequence Match ( AT5G62740.1 )
(BLAST)

001: MGNLFCCVQV DQSTVAIKET FGKFEDVLEP GCHFLPWCLG SQVAGYLSLR VQQLDVRCET KTKDNVFVNV VASIQYRALA NKANDAYYKL SNTRGQIQAY
101: VFDVIRASVP KLLLDDVFEQ KNDIAKAVEE ELEKAMSAYG YEIVQTLIVD IEPDEHVKRA MNEINAAARM RLAANEKAEA EKILQIKRAE GEAESKYLSG
201: LGIARQRQAI VDGLRDSVLG FAVNVPGTTA KDVMDMVLVT QYFDTMKEIG ASSKSSAVFI PHGPGAVRDV ASQIRDGLLQ GSSANL

Arabidopsis Description

HIR1HIR4 [Source:UniProtKB/TrEMBL;Acc:A0A178U8N7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.