Factsheet for TraesCS5D01G221800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G211700.1	Wheat	cytosol	99.3	99.3
TraesCS5A01G212100.1	Wheat	cytosol	99.3	99.3
HORVU5Hr1G062410.6	Barley	cytosol	98.26	93.07
Os05t0591900-05	Rice	cytosol	90.94	90.62
KXG22672	Sorghum	cytosol	89.9	89.9
TraesCS5D01G221900.1	Wheat	cytosol	98.95	89.03
Bra029247.1-P	Field mustard	cytosol	86.41	86.41
Bra010119.1-P	Field mustard	cytosol	86.06	86.06
AT5G62740.1	Thale cress	cytosol	85.37	85.66
PGSC0003DMT400083045	Potato	cytosol	84.67	85.26
Bra010118.1-P	Field mustard	cytosol	83.97	83.97
Bra008363.1-P	Field mustard	cytosol	69.34	83.61
KRH03423	Soybean	cytosol	82.58	83.45
PGSC0003DMT400065192	Potato	cytosol	82.23	82.81
Solyc06g071050.2.1	Tomato	nucleus	83.28	82.7
Solyc03g113220.2.1	Tomato	nucleus	81.88	82.46
KRH56959	Soybean	cytosol, extracellular	80.84	81.69
TraesCS5D01G195900.1	Wheat	cytosol	78.75	79.58
TraesCS4D01G322000.1	Wheat	cytosol	78.4	79.23
VIT_17s0000g05680.t01	Wine grape	extracellular	85.71	75.46
Zm00001d039173_P002	Maize	plastid	89.55	75.37
GSMUA_Achr6P35910_001	Banana	cytosol	83.28	71.99
TraesCS1D01G144600.2	Wheat	golgi	80.84	69.46
TraesCS7D01G069900.1	Wheat	extracellular	55.05	54.86
VIT_12s0034g00930.t01	Wine grape	mitochondrion	28.22	38.57
VIT_05s0020g03390.t01	Wine grape	extracellular	5.92	11.81

Protein Annotations

EnsemblPlants:TraesCS5D01G221800.1	EnsemblPlantsGene:TraesCS5D01G221800	Gene3D:3.30.479.30	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	ncoils:Coil
PANTHER:PTHR43327	PANTHER:PTHR43327:SF6	PFAM:PF01145	SMART:SM00244	SUPFAM:SSF117892	TIGR:cd03407
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:329275152..329276828

Molecular Weight (calculated)

31546.8 Da

IEP (calculated)

5.216

GRAVY (calculated)

-0.131

Length

287 amino acids

Sequence
(BLAST)

001: MGNLCCCVQV DQSTVAIREQ FGKFDSVLEP GCHCLPWIFG KRVVGHLTLR LQQLDVRCET KTKDNVFVTV VASIQYRPLA GKESDAYYKL TNTRSQIQAY
101: VFDVIRASVP KLNLDDAFVQ KNDIAQAVED ELEKAMSAYG FEIVQTLIVD IEPDAHVKQA MNEINAAARM RVAANEKAEA EKIVQIKRAE GEAEAKYLSG
201: LGIARQRQAI VDGLRDSVLG FSVNVPGTTA KDVMDMVLIT QYFDTMKEVG ASSKSSAVFI PHGPGAVRDI ATQIRDDLLQ GQSASDN

Best Arabidopsis Sequence Match ( AT1G69840.3 )
(BLAST)

001: MGQALGCIQV DQSNVAIKET FGKFDEVLEP GCHCLPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE

Arabidopsis Description

HIR2Hypersensitive-induced response protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.