Factsheet for TraesCS7D01G069900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
cytosol 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytoskeleton, cytosol, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytoskeleton
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G372600.1	Wheat	golgi	100.0	100.0
HORVU7Hr1G017190.1	Barley	vacuole	98.96	98.96
Zm00001d036073_P002	Maize	plasma membrane	90.62	90.62
EER89146	Sorghum	extracellular	90.62	90.62
GSMUA_Achr1P16680_001	Banana	cytosol, extracellular	82.99	82.41
Solyc03g007190.2.1	Tomato	cytosol, nucleus, plastid	79.17	78.62
PGSC0003DMT400079622	Potato	cytosol	79.17	78.62
KRH09235	Soybean	cytosol	79.51	78.42
PGSC0003DMT400070532	Potato	cytosol	79.17	78.08
KRH38733	Soybean	endoplasmic reticulum	78.82	77.74
VIT_16s0022g01690.t01	Wine grape	cytosol	77.78	77.51
AT5G51570.1	Thale cress	cytosol	76.39	75.34
CDY32626	Canola	cytosol	74.65	73.63
Bra029166.1-P	Field mustard	cytosol	74.65	73.63
CDY38872	Canola	cytosol	74.31	73.29
TraesCS5D01G195900.1	Wheat	cytosol	56.94	57.75
TraesCS4D01G322000.1	Wheat	cytosol	56.25	57.04
TraesCS5D01G221800.1	Wheat	cytosol	54.86	55.05
TraesCS5D01G221900.1	Wheat	cytosol	55.56	50.16
TraesCS1D01G144600.2	Wheat	golgi	55.21	47.6
Os06t0135000-01	Rice	extracellular	12.5	46.15

Protein Annotations

EnsemblPlants:TraesCS7D01G069900.1	EnsemblPlantsGene:TraesCS7D01G069900	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005794	GO:GO:0005886	GO:GO:0009506
GO:GO:0016020	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	PANTHER:PTHR43327	PANTHER:PTHR43327:SF11	PFAM:PF01145
SMART:SM00244	SUPFAM:SSF117892	TIGR:cd03407	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr7D:-:40854016..40856731

Molecular Weight (calculated)

32060.5 Da

IEP (calculated)

5.073

GRAVY (calculated)

-0.082

Length

288 amino acids

Sequence
(BLAST)

001: MVSAFFLFCG CVEQANVAVV EKWGRFLRLA EPGLHFFNPF AGELVAGTLS TRVQSLDVKV ETKTKDNVFV QLICTIQYRV VKENADDAFY ELQNPQQQIQ
101: SYVFDVVRAI VPRMELDSLF EQKNDVAKAV LEELEKVMSD YGYSIEHILM VDIIPDAAVR RAMNDINAAQ RLQLASVYKG EAEKIHLVKK AEGEAEAKYL
201: SGVGIAKQRQ AITDGLRENI LNFSHSVSGT SAKEVMDLIM VTQYFDTIKE LGDNSKTTTV FIPHGPGHVK DIGDQIRTGM MEASSSGL

Best Arabidopsis Sequence Match ( AT5G51570.1 )
(BLAST)

001: MGNTYCILGG CIEQASVGVV ERWGRFEHIA EPGCHFFNPL AGQWLAGVLS TRIKSLDVKI ETKTKDNVFV QLVCSIQYRV VKASADDAFY ELQNPKEQIQ
101: AYVFDVVRAL VPMMTLDALF EQKGEVAKSV LEELEKVMGA YGYSIEHILM VDIIPDPSVR KAMNEINAAQ RLQLASVYKG EAEKILQVKR AEAEAEAKYL
201: GGVGVARQRQ AITDGLRENI LNFSDKVEGT SAKEVMDLIM ITQYFDTIRD LGNSSKNTTV FLPHGPGHVR DISDQIRNGM MEAAASTQVN DV

Arabidopsis Description

HIR4Hypersensitive-induced response protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.