CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036073_P002	Maize	plasma membrane	98.26	98.26
TraesCS7D01G069900.1	Wheat	extracellular	90.62	90.62
TraesCS7A01G074700.1	Wheat	extracellular	90.62	90.62
TraesCS4A01G372600.1	Wheat	golgi	90.62	90.62
HORVU7Hr1G017190.1	Barley	vacuole	90.28	90.28
GSMUA_Achr1P16680_001	Banana	cytosol, extracellular	85.42	84.83
KRH09235	Soybean	cytosol	82.29	81.16
KRH38733	Soybean	endoplasmic reticulum	81.6	80.48
VIT_16s0022g01690.t01	Wine grape	cytosol	80.21	79.93
PGSC0003DMT400070532	Potato	cytosol	80.9	79.79
PGSC0003DMT400079622	Potato	cytosol	79.51	78.97
Solyc03g007190.2.1	Tomato	cytosol, nucleus, plastid	79.17	78.62
AT5G51570.1	Thale cress	cytosol	77.78	76.71
Bra029166.1-P	Field mustard	cytosol	76.74	75.68
CDY32626	Canola	cytosol	76.74	75.68
CDY38872	Canola	cytosol	76.39	75.34
KXG22672	Sorghum	cytosol	59.38	59.58
EER96630	Sorghum	cytosol	58.33	59.15
OQU91678	Sorghum	cytosol	20.83	57.14
EES03186	Sorghum	cytosol	51.74	50.51
Os06t0135000-01	Rice	extracellular	13.19	48.72
KXG25127	Sorghum	mitochondrion	59.03	41.16

Protein Annotations

Gene3D:3.30.479.30	MapMan:35.1	EntrezGene:8068409	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	UniProt:C5Z3F5
EnsemblPlants:EER89146	ProteinID:EER89146	ProteinID:EER89146.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005794	GO:GO:0005886	GO:GO:0009506
GO:GO:0016020	PFAM:PF01145	PANTHER:PTHR43327	PANTHER:PTHR43327:SF11	SMART:SM00244	EnsemblPlantsGene:SORBI_3010G026300
SUPFAM:SSF117892	unigene:Sbi.1845	UniParc:UPI0001A89AA4	RefSeq:XP_002437779.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:2133950..2137015

Molecular Weight (calculated)

32035.6 Da

IEP (calculated)

5.060

GRAVY (calculated)

-0.043

Length

288 amino acids

Sequence
(BLAST)

001: MVNAFFLFCG CVDQASVAVV EKWGRFLRLA DPGLHFFNPF AGECVAGALT TRVQSLDVRV ETKTKDNVFV QLICTIQYRV VKENADDAFY ELQNPQQQIQ
101: AYVFDVVRAI VPRMNLDDLF EQKNDVAKAV LEELEKVMAA YGYSIEHILM VDIIPDAAVR KAMNEINAAQ RLQLASVYKG EAEKILMVKK AEAEAEAKYL
201: SGVGIAKQRQ AITDGLRENI LNFSHSVSGT SAKEVMDLIM VTQYFDTIKE LGDGSKNTTI FIPHGPGHVK DISEQIRDGM MQASSSNV

Best Arabidopsis Sequence Match ( AT5G51570.1 )
(BLAST)

001: MGNTYCILGG CIEQASVGVV ERWGRFEHIA EPGCHFFNPL AGQWLAGVLS TRIKSLDVKI ETKTKDNVFV QLVCSIQYRV VKASADDAFY ELQNPKEQIQ
101: AYVFDVVRAL VPMMTLDALF EQKGEVAKSV LEELEKVMGA YGYSIEHILM VDIIPDPSVR KAMNEINAAQ RLQLASVYKG EAEKILQVKR AEAEAEAKYL
201: GGVGVARQRQ AITDGLRENI LNFSDKVEGT SAKEVMDLIM ITQYFDTIRD LGNSSKNTTV FLPHGPGHVR DISDQIRNGM MEAAASTQVN DV

Arabidopsis Description

HIR4Hypersensitive-induced response protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.