CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 2
plastid 3
cytosol 2
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38733	Soybean	endoplasmic reticulum	98.97	98.97
PGSC0003DMT400070532	Potato	cytosol	88.7	88.7
PGSC0003DMT400079622	Potato	cytosol	86.99	87.59
Solyc03g007190.2.1	Tomato	cytosol, nucleus, plastid	86.64	87.24
VIT_16s0022g01690.t01	Wine grape	cytosol	85.96	86.85
AT5G51570.1	Thale cress	cytosol	83.9	83.9
Zm00001d036073_P002	Maize	plasma membrane	81.51	82.64
EER89146	Sorghum	extracellular	81.16	82.29
Os06t0136000-01	Rice	plasma membrane	81.16	82.29
Bra029166.1-P	Field mustard	cytosol	82.19	82.19
CDY38872	Canola	cytosol	81.85	81.85
CDY32626	Canola	cytosol	81.51	81.51
GSMUA_Achr1P16680_001	Banana	cytosol, extracellular	80.48	81.03
HORVU7Hr1G017190.1	Barley	vacuole	79.11	80.21
TraesCS7D01G069900.1	Wheat	extracellular	78.42	79.51
TraesCS7A01G074700.1	Wheat	extracellular	78.42	79.51
TraesCS4A01G372600.1	Wheat	golgi	78.42	79.51
KRH03423	Soybean	cytosol	57.53	59.15
KRH56959	Soybean	cytosol, extracellular	57.53	59.15
KRG99161	Soybean	cytosol	56.51	57.69
KRH18505	Soybean	endoplasmic reticulum	56.16	57.34
KRG93497	Soybean	cytosol	55.82	56.99
KRH69355	Soybean	cytosol	54.79	55.94
KRH69356	Soybean	cytosol	54.45	55.4
KRH74781	Soybean	cytosol	54.11	55.24
KRH69350	Soybean	cytosol	53.77	54.33
Os06t0135000-01	Rice	extracellular	11.99	44.87
KRH45847	Soybean	cytosol	10.62	43.06
KRH69353	Soybean	cytosol	14.73	30.94

Protein Annotations

EMBL:ACUP02010275	EMBL:BT099117	EMBL:JN083833	EnsemblPlants:KRH09235	EnsemblPlantsGene:GLYMA_16G204900	EntrezGene:100788194
Gene3D:3.30.479.30	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	PANTHER:PTHR43327	PANTHER:PTHR43327:SF11	PFAM:PF01145
ProteinID:KRH09235	ProteinID:KRH09235.1	SEG:seg	SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI0001B1730C
UniProt:C6TN05	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:36586222..36588661

Molecular Weight (calculated)

32635.2 Da

IEP (calculated)

4.981

GRAVY (calculated)

-0.181

Length

292 amino acids

Sequence
(BLAST)

001: MGNTFCLFCG CVAQSSVGVV EQWGRFHRLA QPGFHFFNPL AGECLSGILS TRISSLDVRI ETKTKDNVFV QLLCSIQYRV IKENADDAFY ELQNPQEQIQ
101: AYVFDVTRAI VPRMNLDELF EQKGEVAKAV LEELEKVMGE YGYSIEHILM VDIIPDPAVR KAMNEINAAQ RMQLASQYKG EAEKILLVKK AEAEAEAKYL
201: GGVGVARQRQ AITDGLRENI LNFSHKVEGT NAKEVMDLIM ITQYFDTIKD LGNSSKNTTV FIPHGPGHVR DIGEQIRNGL MEAASAQVNV EE

Best Arabidopsis Sequence Match ( AT5G51570.1 )
(BLAST)

001: MGNTYCILGG CIEQASVGVV ERWGRFEHIA EPGCHFFNPL AGQWLAGVLS TRIKSLDVKI ETKTKDNVFV QLVCSIQYRV VKASADDAFY ELQNPKEQIQ
101: AYVFDVVRAL VPMMTLDALF EQKGEVAKSV LEELEKVMGA YGYSIEHILM VDIIPDPSVR KAMNEINAAQ RLQLASVYKG EAEKILQVKR AEAEAEAKYL
201: GGVGVARQRQ AITDGLRENI LNFSDKVEGT SAKEVMDLIM ITQYFDTIRD LGNSSKNTTV FLPHGPGHVR DISDQIRNGM MEAAASTQVN DV

Arabidopsis Description

HIR4Hypersensitive-induced response protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.