Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 1
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18505 | Soybean | endoplasmic reticulum | 97.9 | 97.9 |
| PGSC0003DMT400005236 | Potato | cytosol | 86.01 | 86.01 |
| KRG99161 | Soybean | cytosol | 82.17 | 82.17 |
| KRH69355 | Soybean | cytosol | 82.17 | 82.17 |
| KRH03423 | Soybean | cytosol | 81.12 | 81.69 |
| KRH56959 | Soybean | cytosol, extracellular | 80.42 | 80.99 |
| KRH74781 | Soybean | cytosol | 78.67 | 78.67 |
| KRH69350 | Soybean | cytosol | 79.37 | 78.55 |
| Solyc03g058930.2.1 | Tomato | cytosol, nucleus | 29.02 | 77.57 |
| KRH69356 | Soybean | cytosol | 77.62 | 77.35 |
| KRH45847 | Soybean | cytosol | 17.83 | 70.83 |
| KRH09235 | Soybean | cytosol | 56.99 | 55.82 |
| KRH38733 | Soybean | endoplasmic reticulum | 56.64 | 55.48 |
| KRH69353 | Soybean | cytosol | 21.68 | 44.6 |
Protein Annotations
| EMBL:ACUP02011570 | EnsemblPlants:KRG93497 | EnsemblPlantsGene:GLYMA_19G020000 | EntrezGene:100779369 | Gene3D:3.30.479.30 | InterPro:Band_7 |
| InterPro:Band_7/SPFH_dom_sf | ncoils:Coil | PANTHER:PTHR43327 | PANTHER:PTHR43327:SF13 | PFAM:PF01145 | ProteinID:KRG93497 |
| ProteinID:KRG93497.1 | ProteinID:KRG93498.1 | ProteinID:KRG93499.1 | ProteinID:KRG93500.1 | SEG:seg | SMART:SM00244 |
| SUPFAM:SSF117892 | UniParc:UPI000233F17F | UniProt:I1N627 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr19:+:2135278..2138545
Molecular Weight (calculated)
31551.6 Da
IEP (calculated)
4.862
GRAVY (calculated)
-0.176
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQAFGCYQV DQSNVAIKEH FGKFDDVLEP GCHCLPWCLG YQIAGSLSLR VQQLDVRCET KTKDNVFVNV VASVQYRAVS EKASDAFYRL TNTREQIQSY
101: VFDVIRASVP KLELDSVFEQ KNDIAKAVEE ELEKAMSTYG FEIVQTLIVD IEPDVNVKRA MNEINAAARL RLAANEKAEA EKILQIKKAE GEAESKYLSG
201: LGIARQRQAI VDGLRDSVLA FSENVPGTSA KDVMDMVLVT QYFDTMKEIG ASSRSSSVFI PHGPGAVKDI AVQIRDGLLQ ATASQN
101: VFDVIRASVP KLELDSVFEQ KNDIAKAVEE ELEKAMSTYG FEIVQTLIVD IEPDVNVKRA MNEINAAARL RLAANEKAEA EKILQIKKAE GEAESKYLSG
201: LGIARQRQAI VDGLRDSVLA FSENVPGTSA KDVMDMVLVT QYFDTMKEIG ASSRSSSVFI PHGPGAVKDI AVQIRDGLLQ ATASQN
001: MGQALGCIQV DQSNVAIKET FGKFDEVLEP GCHCLPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE
Arabidopsis Description
HIR2Hypersensitive-induced response protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.