Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029166.1-P | Field mustard | cytosol | 92.47 | 92.47 |
| CDY32626 | Canola | cytosol | 92.12 | 92.12 |
| CDY38872 | Canola | cytosol | 92.12 | 92.12 |
| PGSC0003DMT400070532 | Potato | cytosol | 86.3 | 86.3 |
| PGSC0003DMT400079622 | Potato | cytosol | 84.25 | 84.83 |
| Solyc03g007190.2.1 | Tomato | cytosol, nucleus, plastid | 83.9 | 84.48 |
| VIT_16s0022g01690.t01 | Wine grape | cytosol | 83.22 | 84.08 |
| KRH09235 | Soybean | cytosol | 83.9 | 83.9 |
| KRH38733 | Soybean | endoplasmic reticulum | 83.56 | 83.56 |
| GSMUA_Achr1P16680_001 | Banana | cytosol, extracellular | 79.11 | 79.66 |
| Os06t0136000-01 | Rice | plasma membrane | 77.74 | 78.82 |
| Zm00001d036073_P002 | Maize | plasma membrane | 76.71 | 77.78 |
| EER89146 | Sorghum | extracellular | 76.71 | 77.78 |
| HORVU7Hr1G017190.1 | Barley | vacuole | 75.34 | 76.39 |
| TraesCS4A01G372600.1 | Wheat | golgi | 75.34 | 76.39 |
| TraesCS7A01G074700.1 | Wheat | extracellular | 75.34 | 76.39 |
| TraesCS7D01G069900.1 | Wheat | extracellular | 75.34 | 76.39 |
| AT5G62740.1 | Thale cress | cytosol | 56.16 | 57.34 |
| AT3G01290.1 | Thale cress | cytosol | 55.82 | 57.19 |
| AT1G69840.3 | Thale cress | cytosol | 55.82 | 56.99 |
| Os06t0135000-01 | Rice | extracellular | 11.64 | 43.59 |
Protein Annotations
| Gene3D:3.30.479.30 | MapMan:35.1 | EntrezGene:835231 | UniProt:A0A178UM06 | ProteinID:AED96099.1 | EMBL:AK227961 |
| ArrayExpress:AT5G51570 | EnsemblPlantsGene:AT5G51570 | RefSeq:AT5G51570 | TAIR:AT5G51570 | RefSeq:AT5G51570-TAIR-G | EnsemblPlants:AT5G51570.1 |
| TAIR:AT5G51570.1 | Unigene:At.7811 | ProteinID:BAB08673.1 | EMBL:BT006203 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 |
| GO:GO:0005794 | GO:GO:0005886 | GO:GO:0009506 | GO:GO:0016020 | RefSeq:NP_199970.1 | ProteinID:OAO94072.1 |
| PFAM:PF01145 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR43327 | PANTHER:PTHR43327:SF11 | UniProt:Q9FHM7 |
| SMART:SM00244 | SUPFAM:SSF117892 | UniParc:UPI00000A76BA | : | : | : |
Description
HIR4Hypersensitive-induced response protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM7]
Coordinates
chr5:+:20949291..20951512
Molecular Weight (calculated)
32380.0 Da
IEP (calculated)
5.083
GRAVY (calculated)
-0.116
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNTYCILGG CIEQASVGVV ERWGRFEHIA EPGCHFFNPL AGQWLAGVLS TRIKSLDVKI ETKTKDNVFV QLVCSIQYRV VKASADDAFY ELQNPKEQIQ
101: AYVFDVVRAL VPMMTLDALF EQKGEVAKSV LEELEKVMGA YGYSIEHILM VDIIPDPSVR KAMNEINAAQ RLQLASVYKG EAEKILQVKR AEAEAEAKYL
201: GGVGVARQRQ AITDGLRENI LNFSDKVEGT SAKEVMDLIM ITQYFDTIRD LGNSSKNTTV FLPHGPGHVR DISDQIRNGM MEAAASTQVN DV
101: AYVFDVVRAL VPMMTLDALF EQKGEVAKSV LEELEKVMGA YGYSIEHILM VDIIPDPSVR KAMNEINAAQ RLQLASVYKG EAEKILQVKR AEAEAEAKYL
201: GGVGVARQRQ AITDGLRENI LNFSDKVEGT SAKEVMDLIM ITQYFDTIRD LGNSSKNTTV FLPHGPGHVR DISDQIRNGM MEAAASTQVN DV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.