Factsheet for HORVU7Hr1G017190.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
golgi 3
plastid 2
cytosol 2
mitochondrion 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

vacuole: 16581873

msms PMID: 16581873 doi

A Endler, S Meyer, S Schelbert, T Schneider, W Weschke, SW Peters, F Keller, S Baginsky, E Martinoia, UG Schmidt

University of Zurich, Institute of Plant Biology, CH-8008 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G069900.1	Wheat	extracellular	98.96	98.96
TraesCS7A01G074700.1	Wheat	extracellular	98.96	98.96
TraesCS4A01G372600.1	Wheat	golgi	98.96	98.96
Zm00001d036073_P002	Maize	plasma membrane	90.62	90.62
EER89146	Sorghum	extracellular	90.28	90.28
GSMUA_Achr1P16680_001	Banana	cytosol, extracellular	82.64	82.07
KRH09235	Soybean	cytosol	80.21	79.11
PGSC0003DMT400079622	Potato	cytosol	79.17	78.62
Solyc03g007190.2.1	Tomato	cytosol, nucleus, plastid	79.17	78.62
KRH38733	Soybean	endoplasmic reticulum	79.51	78.42
PGSC0003DMT400070532	Potato	cytosol	79.17	78.08
VIT_16s0022g01690.t01	Wine grape	cytosol	77.78	77.51
AT5G51570.1	Thale cress	cytosol	76.39	75.34
CDY32626	Canola	cytosol	74.65	73.63
Bra029166.1-P	Field mustard	cytosol	74.65	73.63
CDY38872	Canola	cytosol	74.31	73.29
HORVU2Hr1G012690.1	Barley	cytosol	51.74	62.08
HORVU4Hr1G082240.6	Barley	cytosol	57.99	57.99
HORVU5Hr1G056950.4	Barley	cytosol	56.94	57.54
HORVU5Hr1G062410.6	Barley	cytosol	54.86	52.15
HORVU1Hr1G038810.3	Barley	golgi	55.21	47.6
Os06t0135000-01	Rice	extracellular	12.5	46.15

Protein Annotations

Gene3D:3.30.479.30	MapMan:35.1	ProteinID:AAN17454.1	EMBL:AK363856	EMBL:AY137514	InterPro:Band_7
InterPro:Band_7/SPFH_dom_sf	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005774	GO:GO:0005794	GO:GO:0005886	GO:GO:0009506	GO:GO:0016020	EnsemblPlantsGene:HORVU7Hr1G017190
EnsemblPlants:HORVU7Hr1G017190.1	PFAM:PF01145	PANTHER:PTHR43327	PANTHER:PTHR43327:SF11	UniProt:Q8H1V6	SMART:SM00244
SUPFAM:SSF117892	UniParc:UPI00000ADA16	:	:	:	:

Description

Hypersensitive-induced reaction protein 4 [Source:UniProtKB/TrEMBL;Acc:Q8H1V6]

Coordinates

chrchr7H:-:21858139..21861364

Molecular Weight (calculated)

32058.5 Da

IEP (calculated)

5.078

GRAVY (calculated)

-0.085

Length

288 amino acids

Sequence
(BLAST)

001: MVSAFFLFCG CVEQANVAVV EKWGRFLRLA EPGLHFFNPC AGELVAGTLS TRVQSLDVRV ETKTKDNVFV QLICTIQYRV VKENADDAFY ELQNPQQQIQ
101: SYVFDVVRAI VPRMELDSLF EQKNEVAKAV LEELEKVMSD YGYSIEHILM VDIIPDAAVR RAMNDINAAQ RLQLASVYKG EAEKIHLVKK AEGEAEAKYL
201: SGVGIAKQRQ AITDGLRENI LNFSHSVSGT SAKEVMDLIM VTQYFDTIKE LGDNSKTTTV FIPHGPGHVK DIGDQIRTGM MEASSSGL

Best Arabidopsis Sequence Match ( AT5G51570.1 )
(BLAST)

001: MGNTYCILGG CIEQASVGVV ERWGRFEHIA EPGCHFFNPL AGQWLAGVLS TRIKSLDVKI ETKTKDNVFV QLVCSIQYRV VKASADDAFY ELQNPKEQIQ
101: AYVFDVVRAL VPMMTLDALF EQKGEVAKSV LEELEKVMGA YGYSIEHILM VDIIPDPSVR KAMNEINAAQ RLQLASVYKG EAEKILQVKR AEAEAEAKYL
201: GGVGVARQRQ AITDGLRENI LNFSDKVEGT SAKEVMDLIM ITQYFDTIRD LGNSSKNTTV FLPHGPGHVR DISDQIRNGM MEAAASTQVN DV

Arabidopsis Description

HIR4Hypersensitive-induced response protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.