Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- extracellular 3
- nucleus 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89146 | Sorghum | extracellular | 48.72 | 13.19 |
| Os06t0136000-01 | Rice | plasma membrane | 48.72 | 13.19 |
| Zm00001d036073_P002 | Maize | plasma membrane | 47.44 | 12.85 |
| TraesCS7D01G069900.1 | Wheat | extracellular | 46.15 | 12.5 |
| TraesCS7A01G074700.1 | Wheat | extracellular | 46.15 | 12.5 |
| HORVU7Hr1G017190.1 | Barley | vacuole | 46.15 | 12.5 |
| TraesCS4A01G372600.1 | Wheat | golgi | 46.15 | 12.5 |
| GSMUA_Achr1P16680_001 | Banana | cytosol, extracellular | 46.15 | 12.41 |
| Bra029166.1-P | Field mustard | cytosol | 44.87 | 11.99 |
| KRH38733 | Soybean | endoplasmic reticulum | 44.87 | 11.99 |
| KRH09235 | Soybean | cytosol | 44.87 | 11.99 |
| CDY38872 | Canola | cytosol | 44.87 | 11.99 |
| CDY32626 | Canola | cytosol | 44.87 | 11.99 |
| AT5G51570.1 | Thale cress | cytosol | 43.59 | 11.64 |
| VIT_16s0022g01690.t01 | Wine grape | cytosol | 41.03 | 11.07 |
| PGSC0003DMT400079622 | Potato | cytosol | 41.03 | 11.03 |
| Solyc03g007190.2.1 | Tomato | cytosol, nucleus, plastid | 41.03 | 11.03 |
| PGSC0003DMT400070532 | Potato | cytosol | 41.03 | 10.96 |
| Os08t0398400-01 | Rice | plasma membrane | 30.77 | 8.45 |
| Os05t0591900-05 | Rice | cytosol | 30.77 | 8.33 |
| Os09t0361200-01 | Rice | plasma membrane | 29.49 | 8.01 |
| Os01t0588400-01 | Rice | plasma membrane | 28.21 | 7.07 |
| Os01t0588100-00 | Rice | cytosol | 25.64 | 6.37 |
Protein Annotations
| EnsemblPlants:Os06t0135000-01 | EnsemblPlantsGene:Os06g0135000 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR43327 |
| PANTHER:PTHR43327:SF11 | ProteinID:BAS96022.1 | TMHMM:TMhelix | UniParc:UPI0000E1266B | UniProt:A0A0P0WSM7 | MapMan:35.2 |
Description
Similar to Hypersensitive-induced reaction protein 4. (Os06t0135000-01)
Coordinates
chr6:+:1880537..1890909
Molecular Weight (calculated)
8990.9 Da
IEP (calculated)
8.035
GRAVY (calculated)
0.142
Length
78 amino acids
Sequence
(BLAST)
(BLAST)
1: RIKYLNNCQG TIVLYGAEAS LKCRSFWFII GLVFVQLICA IQYRVVKEHA DDAFYELQNP QQQIQAYAFD GKLLTLSN
001: MGNTYCILGG CIEQASVGVV ERWGRFEHIA EPGCHFFNPL AGQWLAGVLS TRIKSLDVKI ETKTKDNVFV QLVCSIQYRV VKASADDAFY ELQNPKEQIQ
101: AYVFDVVRAL VPMMTLDALF EQKGEVAKSV LEELEKVMGA YGYSIEHILM VDIIPDPSVR KAMNEINAAQ RLQLASVYKG EAEKILQVKR AEAEAEAKYL
201: GGVGVARQRQ AITDGLRENI LNFSDKVEGT SAKEVMDLIM ITQYFDTIRD LGNSSKNTTV FLPHGPGHVR DISDQIRNGM MEAAASTQVN DV
101: AYVFDVVRAL VPMMTLDALF EQKGEVAKSV LEELEKVMGA YGYSIEHILM VDIIPDPSVR KAMNEINAAQ RLQLASVYKG EAEKILQVKR AEAEAEAKYL
201: GGVGVARQRQ AITDGLRENI LNFSDKVEGT SAKEVMDLIM ITQYFDTIRD LGNSSKNTTV FLPHGPGHVR DISDQIRNGM MEAAASTQVN DV
Arabidopsis Description
HIR4Hypersensitive-induced response protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.