Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0398400-01 | Rice | plasma membrane | 51.59 | 57.04 |
| Os05t0591900-05 | Rice | cytosol | 51.91 | 56.6 |
| Os09t0361200-01 | Rice | plasma membrane | 50.96 | 55.75 |
| Zm00001d028839_P001 | Maize | cytosol | 19.43 | 55.45 |
| Os01t0588400-01 | Rice | plasma membrane | 50.0 | 50.48 |
| Zm00001d003131_P001 | Maize | cytosol | 20.06 | 49.22 |
| Os06t0136000-01 | Rice | plasma membrane | 37.58 | 40.97 |
| GSMUA_Achr8P26210_001 | Banana | cytosol | 24.84 | 28.68 |
| Os06t0135000-01 | Rice | extracellular | 6.37 | 25.64 |
Protein Annotations
| EnsemblPlants:Os01t0588100-00 | EnsemblPlantsGene:Os01g0588100 | EntrezGene:107277012 | Gene3D:3.30.479.30 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf |
| ncoils:Coil | PANTHER:PTHR43327 | PANTHER:PTHR43327:SF16 | PFAM:PF01145 | ProteinID:BAB89920.1 | ProteinID:BAS72919.1 |
| RefSeq:XP_015611908.1 | RefSeq:XP_015611909.1 | RefSeq:XP_015611917.1 | SEG:seg | SMART:SM00244 | SUPFAM:SSF117892 |
| UniParc:UPI00000A00F6 | UniProt:Q8S1F1 | MapMan:35.1 | : | : | : |
Description
Similar to Hypersensitive-induced response protein. (Os01t0588100-00)
Coordinates
chr1:+:22906348..22907811
Molecular Weight (calculated)
33408.3 Da
IEP (calculated)
5.266
GRAVY (calculated)
0.168
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNLLCCVEV EESTVAMRER FGKFDGVMEP GCHFVPWFLG LQARGPLSLR LRQLEIRCPT KTKDNVYVTI VTCVQYRALA DKASHAFYTL INTRSQIQAH
101: VFDVLRTSIP KLALEEVFDK KKEIAEALEE EVAEAMAPYG YEVMRALVVD VEPEEAVRRA MGESRAAADR AVAERAARAG RAEADAEAAR LAGVGAARHR
201: QAVVDGLRAC VVAFCAAVPG ATPREVMDMV LVAQYLDTVR EIAAASASGC SAAAAVPFLP HGPAAARDAV AQIRDGLLQA VQPPAAAAAA SVAAVGLPLP
301: LPVASVCEGI TEEQ
101: VFDVLRTSIP KLALEEVFDK KKEIAEALEE EVAEAMAPYG YEVMRALVVD VEPEEAVRRA MGESRAAADR AVAERAARAG RAEADAEAAR LAGVGAARHR
201: QAVVDGLRAC VVAFCAAVPG ATPREVMDMV LVAQYLDTVR EIAAASASGC SAAAAVPFLP HGPAAARDAV AQIRDGLLQA VQPPAAAAAA SVAAVGLPLP
301: LPVASVCEGI TEEQ
001: MGQALGCIQV DQSNVAIKET FGKFDEVLEP GCHCLPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE
Arabidopsis Description
HIR2Hypersensitive-induced response protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.