Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 6
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03186 | Sorghum | cytosol | 79.42 | 83.73 |
| Zm00001d044323_P001 | Maize | cytosol | 31.51 | 80.33 |
| Os08t0398400-01 | Rice | plasma membrane | 64.63 | 70.77 |
| Os09t0361200-01 | Rice | plasma membrane | 62.7 | 67.94 |
| Os05t0591900-05 | Rice | cytosol | 62.06 | 67.01 |
| Os06t0136000-01 | Rice | plasma membrane | 48.87 | 52.78 |
| Os01t0588100-00 | Rice | cytosol | 50.48 | 50.0 |
| Zm00001d003689_P001 | Maize | cytosol | 24.44 | 45.51 |
| Os06t0135000-01 | Rice | extracellular | 7.07 | 28.21 |
Protein Annotations
| EMBL:AK107346 | EnsemblPlants:Os01t0588400-01 | EnsemblPlantsGene:Os01g0588400 | EntrezGene:4327666 | Gene3D:3.30.479.30 | InterPro:Band_7 |
| InterPro:Band_7/SPFH_dom_sf | ncoils:Coil | PANTHER:PTHR43327 | PANTHER:PTHR43327:SF4 | PFAM:PF01145 | ProteinID:BAB89922.1 |
| ProteinID:BAF05348.1 | ProteinID:BAS72922.1 | ProteinID:EAZ12510.1 | RefSeq:XP_015611928.1 | SEG:seg | SMART:SM00244 |
| SUPFAM:SSF117892 | UniParc:UPI00000A3EC5 | UniProt:Q8S1F0 | MapMan:35.1 | : | : |
Description
Band 7 protein family protein. (Os01t0588400-01)
Coordinates
chr1:-:22914602..22916173
Molecular Weight (calculated)
33398.8 Da
IEP (calculated)
6.287
GRAVY (calculated)
0.012
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGVTSSTSS SSPATAAGGS SYSAEAAQAL CCACVGQSTV AVEEAWGRYD AVLGPGCHFV PWCVGRRVAG YLSLRVQQLD VRCETKTRDN VFVTVVASVQ
101: YRALADRAYD AFYCLTNAHA QIQSYVFDVI RASVPNMNLD EVFGQKKEVA RAVEEELARA MTMYGYEIVQ TLIVDIVPDE VVRRAMNDIN AAARLRVAAA
201: ERAEADKIQQ VKRAEGEAEA KYLAGVGVAR QRQAIVEGLK RFVPNEKDVM DMVLVTQYFD TIRDIGATSR SSTVFIPHGP SAVRDMAAQV RDGLLQATAA
301: AGGGAATLKA L
101: YRALADRAYD AFYCLTNAHA QIQSYVFDVI RASVPNMNLD EVFGQKKEVA RAVEEELARA MTMYGYEIVQ TLIVDIVPDE VVRRAMNDIN AAARLRVAAA
201: ERAEADKIQQ VKRAEGEAEA KYLAGVGVAR QRQAIVEGLK RFVPNEKDVM DMVLVTQYFD TIRDIGATSR SSTVFIPHGP SAVRDMAAQV RDGLLQATAA
301: AGGGAATLKA L
001: MGQALGCIQV DQSNVAIKET FGKFDEVLEP GCHCLPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE
Arabidopsis Description
HIR2Hypersensitive-induced response protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.